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Protein Overview: SPAC2F7.07c

General Information:
Name(s) found: SPAC2F7.07c [Sanger Pombe]
Description(s) found:
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  • pir||S58151 hypothetical protein SPAC2F7.07c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|19113890|ref|NP_592978.1| histone deacetylase complex subunit Rco1 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|1175370|sp|Q09698.1|YA27_SCHPO RecName: Full=Uncharacterized protein C2F7.07c [NCBI NR]
  • gi|1052790|emb|CAA90494.1| Clr6 histone deacetylase associated PHD protein-2 Cph2 [Schizosaccharomyces pombe] [NCBI NR]
  • histone deacetylase complex subunit Rco1 [Sanger Pombe]
  • Uncharacterized protein C2F7.07c OS=Schizosaccharomyces pombe GN=SPAC2F7.07c PE=2 SV=1 [Swiss-Prot]
  • ZINC FINGER PROTEIN; ZF-PHD FINGER: Q09698; [pompepVF.fasta]
  • HYPOTHETICAL PHD-FINGER PROTEIN: Q09698; [pompepV13]
  • Hypothetical protein C2F7.07c in chromosome I [pompep4896]
  • |||zinc finger protein [pompepnew.fasta]
  • |||zinc finger protein|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • hypothetical PHD-finger protein [Schizosaccharomyces pombe]gi|1052790|emb|CAA90494.1| SPAC2F7.07c [Schizosaccharomyces pombe]gi|1175370|sp|Q09698|YA27_SCHPO Hypothetical protein C2F7.07c in chromosome Igi|2130376|pir||S58151 hypothetical protein SPAC2F [nrdb_11152004_Chlamydomonas]
  • (Q09698) Hypothetical protein C2F7.07c in chromosome I [pompep4896_normal_reversed]
  • |cph2|rco1|Clr6 histone deacetylase associated PHD protein-2 Cph2|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPAC2F7.07c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC2F7.07c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Uncharacterized protein C2F7.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2F7.07c PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 607 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    spindle [IDALink to PubMed article]
    Rpd3S complex [IDALink to PubMed articleLink to PubMed article]
    Biological Process: chromatin remodeling [ICLink to PubMed article]
    histone deacetylation [ISSLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    small conjugating protein ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAKPWNHTS EAFQASILED LKIIQKAGAE RNAKSSHGSI NSRSASPNKA TSRRNRAQNG  60
   61 NSNGRASVDN SDDGSKDDLD YSPSVKRKHV NGEGAEKGDH DTSNNGPSIT KLRRKVRRTY 120
  121 DTKDGFVAWN TLDDDFRPIV PDQERSRKIN PQKGNNNNLL KENKSLKTTA KDLSDISSSS 180
  181 MKKANNSSKP LFSGKLTFKA NIPVPTSEVV TENNVTRNVT VYSNQKHLGN ESENFNDMEG 240
  241 RAEDISSNEL LPTPEEYPYR YNNDYCSACH GPGNFLCCET CPNSFHFTCI DPPIEEKNLP 300
  301 DDAWYCNECK HHSLYNELDE QEELESNVKE EGTMVDVWMQ LCTYIDSHNP IQFHLPHSIS 360
  361 SFFRGVGSGV MGEYIETDVL KHLKSSRRSN GEERDPLLLK SKSGTPILCF RCHKSALVSQ 420
  421 SILACDYCNS YWHPDCLNPP LATLPSNLRK WKCPNHSDHV TPRYRLPEKA KVIRVGLPRG 480
  481 FKNKGNIVID ENEDEPSVQT IQLQGKIRVV PSKPFKLNFL EQIRDNVINL RKMVEQDEQL 540
  541 CIETFSKFDF YATRDCELPL RILCDVANDN LENDDYVLAL RDLLRISKWD PNQPVPAPFD 600
  601 LANLLSY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] deduced N/A No confident structure predictions are available.
    2 View Details [195..323] PSI-BLAST 4.0 No description for 2jm1A was found.
    3 View Details [324..499] PSI-BLAST 19.522879 No description for 2i13A was found.
    4 View Details [500..607] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle