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Protein Overview: SPAC5H10.02c

General Information:
Name(s) found: SPAC5H10.02c [Sanger Pombe]
Description(s) found:
Found 15 descriptions.
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  • ThiJ domain protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 240 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: cellular response to oxidative stress [IEPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIAKGKNAL LVASSYYGPF YPDGKNTGVH FSELLIPYNV FKKAGFNVQF VSENGSYKFD  60
   61 DHSIEESKLG DFERKVFNDK NDDFWTNLNN MKKASDIVGK DYQLLFVAGG HAAMFDLPKA 120
  121 TNLQAVAREV FTNGGVLSAV CHGPVLLANV KNPQSVEGKT VVYHKHVTAF NKAGEEKMGV 180
  181 MDELKKRGMK SLNEIFAEAG ATFIDPPNPN VNFTQIDGKI VTGVNPQSAK STAEAAVSAL 240
  241

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..240] PSI-BLAST 39.69897 Crystal structure of the S. cerevisiae YDR533c protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.761311388604334 bayes_pls_golite062009
  • binding
    		•  0.674707430307546 bayes_pls_golite062009
  • ligase activity
    		•  0.314215307503825 bayes_pls_golite062009
  • hydrolase activity
    		•  0.132707384514464 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle