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Protein Overview: vps33

General Information:
Name(s) found: vps33 / SPBC1703.15c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • vacuolar sorting protein Vps33 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 592 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    HOPS complex [ISSLink to PubMed article]
    Biological Process: vacuole organization [IMPLink to PubMed article]
    vesicle docking [ISSLink to PubMed article]
    vesicle docking during exocytosis [IEA]
    late endosome to vacuole transport [ISSLink to PubMed article]
    vacuole fusion, non-autophagic [ISSLink to PubMed article]
    protein targeting to vacuole [IMPLink to PubMed article]
    Golgi to endosome transport [ISSLink to PubMed article]
    Molecular Function: ATP binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTDVKEKAT FKLLDLIDSV TGKKSLLLER DLSGILGQIV TTNTLQEHGI PQVYWFNENI  60
   61 PNDIEKKTIY LCRPTYENAK LVATHVRQFQ RDMLRIESTV IVLPTSNILF ETVLQEEGVF 120
  121 GELLVTEWPL HAVPLDKDLL SLELGPEKLE ESLLQRSTDA LIDFERTHGR FPRVSGRGPY 180
  181 AAKMLELLEK TYQEEATINF GKVEGEISAL YDSVLLVDRS LDRITPFLTQ LTYFGFLDEI 240
  241 LGIQQMNVKL PSSLVNRNEA SNTGPMKKFS LSSSSSQITK EIRDINFNCI GPYLSKIARK 300
  301 LSSDFEGRRQ AKTVNQIRDF VSKLGSLQSE HTSLNIHTGL AETLVQHTKN NYFQKLLQLQ 360
  361 HLLVSHADSF TQFNLLDEII YAEAPVEEVF RVLCLASITT NGLRRKDIDH YRREITQTYG 420
  421 YYHLLTFQAL IDAGLLRLRQ STNISLQKSL SYSTWLNTYP LVKDEVDEQN PEDIAYTYSG 480
  481 YGPLSVHIAY DILKGRDNEE KILKLQNMPG TYVDKWTLDQ EKVMPKNLKT NVPGKRRVLV 540
  541 FFIGGCTYTE LAAFRLLQEK EDLYEFTFMT TGMVTGSSLI RAFIPNIESL NE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..592] PSI-BLAST 153.0 Neuronal Sec1, NSec1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • SNARE binding
    		•  3.42828022195984 bayes_pls_golite062009
  • binding
    		•  2.7837022903231 bayes_pls_golite062009
  • syntaxin binding
    		•  2.11416428645287 bayes_pls_golite062009
  • protein binding
    		•  1.7224010512877 bayes_pls_golite062009
  • syntaxin-1 binding
    		•  0.269372794919901 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle