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Protein Overview: vma7

General Information:
Name(s) found: vma7 / SPBC3B9.18c [Sanger Pombe]
Description(s) found:
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  • gi|7493599|pir||T40357 vacuolar atp synthase subunit - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|2950484|emb|CAA17798.1| V-type ATPase subunit F (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113468|ref|NP_596676.1| V-type ATPase subunit F (predicted) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|12585411|sp|O43046.1|VATF_SCHPO RecName: Full=V-type proton ATPase subunit F; Short=V-ATPase subunit F; AltName: Full=Vacuolar proton pump subunit F [NCBI NR]
  • V-type ATPase subunit F [Sanger Pombe]
  • V-type proton ATPase subunit F OS=Schizosaccharomyces pombe GN=vma7 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE VACUOLAR ATP SYNTHASE SUBUNIT F; V-TYPE ATPASE F SUBUNIT; VACUOLAR PROTON PUMP COMPONENT; V1 SECTOR: O43046; [pompepVF.fasta]
  • Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) [pompep4896]
  • |vma7||putative vacuolar ATP synthase subunit F [pompepnew.fasta]
  • |vma7||vacuolar ATP synthase (subunit F) (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • V-type ATPase; vacuolar ATP synthase subunit F [Schizosaccharomyces pombe]gi|2950484|emb|CAA17798.1| SPBC3B9.18c [Schizosaccharomyces pombe]gi|7493599|pir||T40357 vacuolar atp synthase subunit - fission yeast (Schizosaccharomyces pombe)gi|12585411|sp| [nrdb_11152004_Chlamydomonas]
  • |vma7||vacuolar ATP synthase |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O43046) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) [pompep4896_normal_reversed]
  • |vma7||V-type ATPase subunit F |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC3B9.18c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Vacuolar ATP synthase subunit F (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) [nr-271106-contam.fasta]
  • SPBC3B9.18c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |vma7||V-type ATPase V1 subunit F |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • V-type proton ATPase subunit F OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vma7 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 120 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    fungal-type vacuole membrane [ISSLink to PubMed article]
    vacuolar proton-transporting V-type ATPase complex [ICLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: ATP hydrolysis coupled proton transport [ICLink to PubMed article]
    vacuolar acidification [TASLink to PubMed article]
    Molecular Function: ATP binding [ICLink to PubMed article]
    proton-transporting ATPase activity, rotational mechanism [NASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQSYRERT LVSVIGDDDT VTGMLLAGTG QVNENGDKNF FIITQKTTDE QIAEAFDDYT  60
   61 TKRKDIAIVL INQFAAERIR DRIENHVQAF PAVLEIPSKD DPYDPEKDSI LRRVRKIIGE 120
  121

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] PSI-BLAST 20.0 No description for 2qaiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle