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Protein Overview: ned8

General Information:
Name(s) found: ned8 / SPBC12D12.08c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • ubiquitin-like protein modifier Ned8 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 78 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    SCF ubiquitin ligase complex [IDALink to PubMed article]
    Biological Process: positive regulation of ubiquitin-protein ligase activity [NASLink to PubMed article]
    protein neddylation [IGILink to PubMed article]
    Molecular Function: protein tag [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIKVKTLTG KEIELDIDPN DKVSRIKERV EEKEGIPPSQ QRLIYAGKQM ADDKNAESYH  60
   61 LEGGSVLHLV LALRGGSC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] PSI-BLAST 32.30103 No description for 2ojrA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle