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Protein Overview: SPAC1687.19c

General Information:
Name(s) found: SPAC1687.19c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • queuine tRNA-ribosyltransferase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 404 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: queuosine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    queuine tRNA-ribosyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSFPALQF KVVARCSTTR ARVTDIQLPH GLVESPVFMP VGTQASLKGV LPEQLDALGC  60
   61 KIMLNNTYHL GLKPGQEVLD TVGGAHRFQS WNKNILTDSG GFQMVSLLKL ATITEDGVTF 120
  121 LSPRDGTPML LTPEHSISLQ NSIGSDIMMQ LDDVVHTLTE SKRMEEAMYR SIRWLDRCIQ 180
  181 AHKRPETQNL FCIIQGGLDK RLREICCREM VKRNTPGIAV GGLSGGEEKH AFCETVYTCT 240
  241 SILPDNKPRY LMGVGYAEDL VVCVALGMDM FDCVYPTRTA RFGNALTRKG VINLRNQKFR 300
  301 NDIGPLEEGC SCPCCKTELE GGWGITRAYF NSLVSKETVG ANLMTIHNVH FQLQLMRDMR 360
  361 ESIIKDEFPS FVKNFFHEWN HGDKSNYPSW AVDALRMVNI DLLA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..404] PSI-BLAST 155.0 Y106F mutant of Z. mobilis TGT

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • queuine tRNA-ribosyltransferase activity
    		•  5.68673071384353 bayes_pls_golite062009
  • transferase activity
    		•  3.21194535271238 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.84864811414771 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  2.53039738178366 bayes_pls_golite062009
  • catalytic activity
    		•  2.02168745464921 bayes_pls_golite062009
  • binding
    		•  1.29132603807317 bayes_pls_golite062009
  • protein binding
    		•  0.136438951368546 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle