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Protein Overview: srb7

General Information:
Name(s) found: srb7 / SPBC1604.10 [Sanger Pombe]
Description(s) found:
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  • pir||T39504 hypothetical protein SPBC1604.10 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|4007762|emb|CAA22343.1| mediator complex subunit Srb7 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|26399919|sp|O94376.1|MED21_SCHPO RecName: Full=Mediator of RNA polymerase II transcription subunit 21; AltName: Full=Mediator complex subunit 21; AltName: Full=Suppressor of RNA polymerase B 7 [NCBI NR]
  • gi|19113422|ref|NP_596630.1| mediator complex subunit Srb7 [Schizosaccharomyces pombe] [NCBI NR]
  • mediator complex subunit Srb7 [Sanger Pombe]
  • (O94376) RNA polymerase II mediator complex protein srb7 [Swiss-Prot]
  • Mediator of RNA polymerase II transcription subunit 21 OS=Schizosaccharomyces pombe GN=med21 PE=1 SV=1 [Swiss-Prot]
  • PUTATIVE COMPONENT OF RNA POLYMERASE II HOLOENZYME AND KORNBERG'S MEDIATOR (SRB) SUBCOMPLEX BY SIMILAR TO S. CEREVISIAE SRB7: O94376; [pompepVF.fasta]
  • PUTATIVE COMPONENT OF RNA POLYMERASE II HOLOENZYME AND KORNBERG'S MEDIATOR (SRB) SUBCOMPLEX BY SIMILARITY TO YEAST SRB7: O94376; [pompepV13]
  • RNA polymerase II mediator complex protein srb7 [pompep4896]
  • |srb7||RNA polymerase II holoenzyme component (PMID 10625684) [pompepnew.fasta]
  • |srb7||RNA polymerase II holoenzyme component (PMID 10625684)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • SPBC1604.10 [Schizosaccharomyces pombe]gi|19113422|ref|NP_596630.1| hypothetical protein [Schizosaccharomyces pombe]gi|26399919|sp|O94376|SRB7_SCHPO RNA polymerase II mediator complex protein srb7gi|7491379|pir||T39504 hypothetical protein SPBC1604.10 [nrdb_11152004_Chlamydomonas]
  • |srb7||RNA polymerase II holoenzyme component |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • |srb7|med21|mediator complex subunit Srb7|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC1604.10 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC1604.10 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • RNA polymerase II mediator complex subunit 21 (Suppressor of RNA polymerase B 7) [nr-271106-contam.fasta]
  • Mediator of RNA polymerase II transcription subunit 21 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=med21 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 138 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    mediator complex [IDALink to PubMed article][NAS]
    cytosol [IDALink to PubMed article]
    Biological Process: transcription from RNA polymerase II promoter [ISSLink to PubMed article]
    regulation of transcription [ICLink to PubMed article]
    gene-specific transcription from RNA polymerase II promoter [ICLink to PubMed article]
    Molecular Function: RNA polymerase II transcription mediator activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACRCTQLQD TIDEVATQFY SSIHYLSSHH DFVPLPGQEK VSDSKVNPIS AEELQFAQRD  60
   61 LAKDLVTKFM QIDTLINQLP GISTAPKHQL EKIKKLQNSI EEKQLERKSL ESENEDLKLQ 120
  121 LAKRIETFGR LSCVLFQP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..138] PSI-BLAST 35.0 Structure of the mediator MED7/MED21 subcomplex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle