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Protein Overview: srp72

General Information:
Name(s) found: srp72 / SPCC320.10 [Sanger Pombe]
Description(s) found:
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  • pir||T41301 probable signal recognition particle protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|6094348|sp|O59787|SRP72_SCHPO Signal recognition particle subunit srp72 (Signal recognition particle 72 kDa protein homolog) [NCBI NR]
  • gi|2995372|emb|CAA18312.1| signal recognition particle subunit Srp72 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19075219|ref|NP_587719.1| signal recognition particle subunit Srp72 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • signal recognition particle subunit Srp72 [Sanger Pombe]
  • Signal recognition particle subunit srp72 OS=Schizosaccharomyces pombe GN=srp72 PE=2 SV=1 [Swiss-Prot]
  • (O59787) Signal recognition particle 72 kDa protein homolog (SRP72) [Swiss-Prot]
  • PUTATIVE SIGNAL RECOGNITION PARTICLE SUBUNIT: O59787; [pompepVF.fasta]
  • Signal recognition particle 72 kDa protein homolog (SRP72) [pompep4896]
  • |srp72||TPR repeat protein [pompepnew.fasta]
  • |srp72||TPR repeat protein|Schizosaccharomyces pombe|chr 3|||Manual [pombe041504.fasta]
  • putative signal recognition particle protein [Schizosaccharomyces pombe]gi|2995372|emb|CAA18312.1| SPCC320.10 [Schizosaccharomyces pombe]gi|7492972|pir||T41301 probable signal recognition particle protein - fission yeast (Schizosaccharomyces pombe)gi|6 [nrdb_11152004_Chlamydomonas]
  • |srp72||signal recognition particle subunit Srp72|Schizosaccharomyces pombe|chr 3|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPCC320.10 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPCC320.10 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Signal recognition particle subunit srp72 (Signal recognition particle 72 kDa protein homolog) [nr-271106-contam.fasta]
  • |srp72||signal recognition particle subunit Srp72 |Schizosaccharomyces pombe|chr 3|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Signal recognition particle subunit srp72 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=srp72 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 561 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    signal recognition particle, endoplasmic reticulum targeting [ISSLink to PubMed article]
    Biological Process: SRP-dependent cotranslational protein targeting to membrane [ISSLink to PubMed article]
    Molecular Function: 7S RNA binding [IEA]
    signal sequence binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNHEEEIEE LAQRIGKIEV GDTKSDIYQK VLNLIDIERY EHALKIIEKY LGETDAVYER  60
   61 AYCAFQLGKE DFSLEDKQFL QHLQAQKAYR LSDFSKALKI YEHLENDLPE QRADIRVNML 120
  121 AAASQLPGLQ LNNAVSLDDQ DSVFNLATRY LTIGDWNQAI ELLSSSLEKL ENSDSNSEDH 180
  181 KSQINLCRLQ LFFAYLQAGD NEKASKESLK ISKDCLDETS QAIFVNNLIS MSIDNPYISF 240
  241 RDLHGTNLEK ALSSLLASQK KQFIRNLALL DMAVGKQRSV RKEKKRNPEE SIYFSTILLR 300
  301 EETKSLISPK KLPGYLENLF KSDSDNIVVA LLLMQHKISN GNFRGALSIY QKLRTSLEAS 360
  361 QSLSVLYSPG LVGLGDALHY KIQSTGFKSQ LLHEAANYWR KQQSCEAKLL LCTRSLLAHL 420
  421 DERAPVSTIQ DDMSVIDDLL QWKGPISELV SCKVAALCYL DKEIESGMDK YLVPTKDLIT 480
  481 GIDVDDIEIR GVPVSAAIGP IKRSVEANSS NSSKKTRKRR KPTPKSFNPK ATPDPQRWIP 540
  541 KRDRTNVKIK SKGKSMQGGV A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..561] PSI-BLAST 19.045757 No description for 2gw1A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle