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Protein Overview: sep11

General Information:
Name(s) found: sep11 / SPAC5D6.05 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • mediator complex subunit Pmc6 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 207 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    mediator complex [IDALink to PubMed article][NAS]
    cytosol [IDALink to PubMed article]
    Biological Process: gene-specific transcription from RNA polymerase II promoter [ICLink to PubMed article]
    regulation of transcription from RNA polymerase II promoter [IEA]
    Molecular Function: protein binding [IPILink to PubMed article]
    RNA polymerase II transcription mediator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQELYLLGVV PSRRFEAVVN SLSKTLDGPK TILEFWVVYR PKDVPPNLPR QPDSWLRLCS  60
   61 NIESHDETDT EWSKNTQWSM YLEGNSEPKR EDKCGIRPVN RAKLTNGSVT EFVEKMGYEF 120
  121 SHEYIIQGLE YFFFDTTVRI YQTLIPSQQR SIKPPFHPMN EEQPWILHVY THVADASNQV 180
  181 AMAKAEANLT KVKTLLSAFC DLKNVRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..207] FFAS03 4.82 No description for 2hzmB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle