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Protein Overview: mrps28

General Information:
Name(s) found: mrps28 / SPBC11B10.04c [Sanger Pombe]
Description(s) found:
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  • gi|2257487|dbj|BAA21384.1| ribosomal protein precursor [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112416|ref|NP_595624.1| mitochondrial ribosomal protein subunit S28 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|13872537|emb|CAC37508.1| mitochondrial ribosomal protein subunit S28 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|13633876|sp|O13602.1|RT28_SCHPO RecName: Full=Probable 40S ribosomal protein S28, mitochondrial; Flags: Precursor [NCBI NR]
  • mitochondrial ribosomal protein subunit S28 [Sanger Pombe]
  • Probable 40S ribosomal protein S28, mitochondrial OS=Schizosaccharomyces pombe GN=mrps28 PE=2 SV=1 [Swiss-Prot]
  • MITOCHONDRIAL RIBOSOMAL PROTEIN S15: O13602; [pompepVF.fasta]
  • Probable 40S ribosomal protein S28, mitochondrial precursor [pompep4896]
  • |||mitochondrial ribosomal protein S15 [pompepnew.fasta]
  • |||mitochondrial ribosomal protein S15|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • mitochondrial ribosomal protein S15 [Schizosaccharomyces pombe]gi|13872537|emb|CAC37508.1| SPBC11B10.04c [Schizosaccharomyces pombe]gi|2257487|dbj|BAA21384.1| ribosomal protein precursor [Schizosaccharomyces pombe]gi|13633876|sp|O13602|RT28_SCHPO Proba [nrdb_11152004_Chlamydomonas]
  • |mrps28||mitochondrial ribosomal protein small subunit s28|Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O13602) Probable 40S ribosomal protein S28, mitochondrial precursor [pompep4896_normal_reversed]
  • |mrps28||mitochondrial ribosomal protein subunit S28|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPACTOKYO_453.29 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • mitochondrial ribosomal protein S15 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • ribosomal protein precursor [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |mrps28||mitochondrial ribosomal protein subunit S28 |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Probable 37S ribosomal protein S28, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrps28 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 288 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial small ribosomal subunit [ISSLink to PubMed article]
    Biological Process: mitochondrial translation [RCALink to PubMed article]
    translation [ISSLink to PubMed article]
    Molecular Function: RNA binding [ISSLink to PubMed article]
    structural constituent of ribosome [ISSLink to PubMed article]
    rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFEGAFQP WKLASTNLMQ QCLLLNKKSQ FHTTCILQGL KKQKANQRRK QNLKRREELR  60
   61 KQNLDTLADP IIGHSSEWIA RLLKPYEILV ERKKPNFPIR SIKFPASMET INLIVEKFEK 120
  121 IRASATEETK DFIKLNEVNE FPSSDTSLES NQDGFERLHP LAERLERMSQ LSDLRKESIH 180
  181 RIFNIENSNS KTLRLNNKQL AVESFARNER DTGSPEVQAA VYTSRILALS DHCKNHKKDQ 240
  241 TGKRMLRYYV HQRQRMLKYL RKVNFDRYVH CIKNLGLTDE LVLREVTQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..205] deduced N/A No confident structure predictions are available.
    2 View Details [206..288] PSI-BLAST 29.39794 No description for 2qalO was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle