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Protein Overview: rps502

General Information:
Name(s) found: rps502 / SPAC328.10c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • 40S ribosomal protein S5 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 203 amino acids

    Gene Ontology:
    Cellular Component: cytosolic small ribosomal subunit [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: ribosome biogenesis [ISS]
    translation [ISSLink to PubMed article]
    Molecular Function: RNA binding [IEA]
    structural constituent of ribosome [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASIIPKEV SLDETGHIKL FNKFPFEGVE VKDISLVDYI TIGNGQPLPH TAGRFQTKRF  60
   61 RKARCFIVER LTNSLMMNGR NNGKKLLATR IVKHAFEIIA LLTDQNPLQV LVDAVAACGP 120
  121 REDSTRIGSA GTVRRQAVDV SPLRRVNQAL ALITIGAREA AFRNVKSISE CLAEEIINAA 180
  181 KGSSNSYAIK KKDELERVAK SNR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..65] FFAS03 2.59 Ribosomal protein S7
    2 View Details [66..203] PSI-BLAST 46.69897 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle