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Protein Overview: rps403

General Information:
Name(s) found: rps403 / SPAC959.07 [Sanger Pombe]
Description(s) found:
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  • gi|8247670|emb|CAB93014.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|26006873|sp|Q9P4W9.1|RS4C_SCHPO RecName: Full=40S ribosomal protein S4-C [NCBI NR]
  • gi|19115086|ref|NP_594174.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe] [NCBI NR]
  • 40S ribosomal protein S4 [Sanger Pombe]
  • 40S ribosomal protein S4-C OS=Schizosaccharomyces pombe GN=rps4c PE=1 SV=1 [Swiss-Prot]
  • 40S RIBOSOMAL PROTEIN S4: Q9P4W9; [pompepVF.fasta]
  • 40S ribosomal protein S4-C [pompep4896]
  • |rps403|rps4-3, rps4|40S ribosomal protein S4 [pompepnew.fasta]
  • |rps403|rps4-3, rps4|40S ribosomal protein S4|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • 40s ribosomal protein s4 [Schizosaccharomyces pombe]gi|8247670|emb|CAB93014.1| 40S ribosomal protein S4; similar to S. cerevisiae RPS4A and RPS4B [Schizosaccharomyces pombe]gi|26006873|sp|Q9P4W9|RS4C_SCHPO 40S ribosomal protein S4-C [nrdb_11152004_Chlamydomonas]
  • (Q9P4W9) 40S ribosomal protein S4-C [pompep4896_normal_reversed]
  • hypothetical protein SPAC959.07 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC959.07 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |rps403|rps4-3, rps4|40S ribosomal protein S4 |Schizosaccharomyces pombe|chr 1|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • 40S ribosomal protein S4-C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rps403 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 262 amino acids

    Gene Ontology:
    Cellular Component: cytosolic small ribosomal subunit [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: translation [ISSLink to PubMed article]
    Molecular Function: RNA binding [IEA]
    structural constituent of ribosome [ISSLink to PubMed article]
    rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRGPKKHLK RVAAPHHWLL DKLSGTYAPK PSPGPHKARE CLPLIVFLRN RLKYALNGRE  60
   61 VKAILMQRLI KVDGKVRTDS TFPTGFMDVI SVDKTGEHFR LVYDIKGRFT VHRITAEEAK 120
  121 YKLCKVKRVQ LGAKGVPFLV THDGRTIRYP DPLIKVNDTI KLNLETNKIE SFIKFDTSAQ 180
  181 VMVTGGRNMG RVGTIVHREH HLGSFEIIHV KDALDREFAT RLSNVFVIGE TGKSWISLPK 240
  241 GKGVKLSITE ERDRRRALKG LA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] MSA 2.05097 View MSA. No confident structure predictions are available.
    2 View Details [68..164] Pfam 40.431798 No description for PF00900.11 was found. No confident structure predictions are available.
    3 View Details [165..262] MSA 6.054983 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle