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Protein Overview: rps401

General Information:
Name(s) found: rps401 / SPBC19F8.08 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • 40S ribosomal protein S4 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 262 amino acids

    Gene Ontology:
    Cellular Component: cytosolic small ribosomal subunit [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: translation [ISSLink to PubMed article]
    Molecular Function: RNA binding [IEA]
    structural constituent of ribosome [ISSLink to PubMed article]
    rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRGPKKHLK RVAAPHHWLL DKLSGTYAPK PSPGPHKARE CLPLIVFLRN RLKYALNGRE  60
   61 VKAILMQRLI KVDGKVRTDS TFPTGFMDVI SVEKTGEHFR LVYDIKGRFT VHRITAEEAK 120
  121 YKLCKVKRVQ LGAKGVPFLV THDGRTIRYP DPLIKVNDTI KLNLETNKIE SFIKFDTSAQ 180
  181 VMVTGGRNMG RVGTIVHREH HLGSFEIIHV KDALDREFAT RLSNVFVIGE TGKSWISLPK 240
  241 GKGVKLSITE ERDRRRALKG LA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] MSA 2.05097 View MSA. No confident structure predictions are available.
    2 View Details [68..164] Pfam 40.431798 No description for PF00900.11 was found. No confident structure predictions are available.
    3 View Details [165..262] MSA 6.054983 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle