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Protein Overview: rps1001

General Information:
Name(s) found: rps1001 / SPAC31G5.17c [Sanger Pombe]
Description(s) found:
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  • pir||T38634 40s ribosomal protein S10 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|6094144|sp|O14112.1|RS10A_SCHPO RecName: Full=40S ribosomal protein S10-A [NCBI NR]
  • gi|2388968|emb|CAB11701.1| 40S ribosomal protein S10 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19114930|ref|NP_594018.1| 40S ribosomal protein S10 [Schizosaccharomyces pombe] [NCBI NR]
  • 40S ribosomal protein S10 [Sanger Pombe]
  • (O14112) 40S ribosomal protein S10-A [Swiss-Prot]
  • 40S ribosomal protein S10-A OS=Schizosaccharomyces pombe GN=rps10a PE=2 SV=1 [Swiss-Prot]
  • 40S RIBOSOMAL PROTEIN S10: O14112; [pompepVF.fasta]
  • 40S ribosomal protein S10-A [pompep4896]
  • |rps1001|rps10-1|40S ribosomal protein S10 [pompepnew.fasta]
  • |rps1001|rps10-1|40S ribosomal protein S10|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • 40s ribosomal protein s10. [Schizosaccharomyces pombe]gi|2388968|emb|CAB11701.1| SPAC31G5.17c [Schizosaccharomyces pombe]gi|7489964|pir||T38634 40s ribosomal protein S10 - fission yeast (Schizosaccharomyces pombe)gi|6094144|sp|O14112|RS1A_SCHPO 40S ri [nrdb_11152004_Chlamydomonas]
  • |rps1001|rps10-1|40S ribosomal protein S10 |Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPAC31G5.17c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC31G5.17c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • 40S ribosomal protein S10-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rps1001 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 144 amino acids

    Gene Ontology:
    Cellular Component: cytosolic small ribosomal subunit [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: ribosomal subunit export from nucleus [ISS]
    translation [ISSLink to PubMed article]
    Molecular Function: structural constituent of ribosome [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIPKENRKA IHQALFSQGV LVAKKDFNLP KHPEVGVPNL QVIKACQSLD SRGYLKTRYN  60
   61 WGWFYYTLTN EGVEYLREYL HLPAEVVPAT HKRQVRPTAP RAGRPEPRER ASADAGYRRA 120
  121 EKKDEGAAPS GFAPSFRGGF GRPQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..144] FFAS03 1.11 Structure of the transcriptional regulator homologue protein from Pyrococcus horikoshii OT3


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle