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Protein Overview: rps002

General Information:
Name(s) found: rps002 / SPAPJ698.02c [Sanger Pombe]
Description(s) found:
Found 15 descriptions.
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  • 40S ribosomal protein S0B [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 287 amino acids

    Gene Ontology:
    Cellular Component: cytosolic ribosome [RCALink to PubMed article]
    cytosol [IDALink to PubMed article]
    small ribosomal subunit [TASLink to PubMed article]
    Biological Process: ribosomal small subunit biogenesis [IMPLink to PubMed article]
    translation [ICLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]
    structural constituent of ribosome [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESIARPSV LNATDDDIKN LLAADSHIGS KNLEVRMENY VWKRRSDGIH IINLGKTWEK  60
   61 LVLAARVIAT IENPADVCVI SSRPYGHRAV LKFAAHTGAT AIAGRFTPGN FTNYITRTYR 120
  121 EPRLIIVTDP RADAQAIKEA SFVNIPVIAL CDTDSILNHV DVAIPINNKG YKSIGLAWYL 180
  181 LAREVLRLRG NISRTTAWEV MPDLYFYRDP EEIEREEEQK AAAAAAAEEE AQLAAQTAAA 240
  241 EFEVTDSAAG TVDPTILDNA TAGQVGQTTW EGDAEWNITG AAPSEWA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..211] PSI-BLAST 59.0 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.
    2 View Details [212..287] MSA 1.111993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle