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Protein Overview: rpb11

General Information:
Name(s) found: rpb11 / SPAC3A12.07 [Sanger Pombe]
Description(s) found:
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  • pir||T38675 DNA-directed RNA polymerase (EC 2.7.7.6) II chain Rpb11 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|3219850|sp|P87123.1|RPB11_SCHPO RecName: Full=DNA-directed RNA polymerase II subunit RPB11; Short=RNA polymerase II subunit B11; AltName: Full=DNA-directed RNA polymerase II 14.1 kDa polypeptide [NCBI NR]
  • gi|2708530|gb|AAB92517.1| Rpb11 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|2529251|dbj|BAA22806.1| RNA polymerase II subunit Rpb11 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|2529239|dbj|BAA22801.1| RNA polymeraseII subunit Rpb11 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|2104423|emb|CAB08752.1| RNA polymerase II complex subunit Rpb11 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19114245|ref|NP_593333.1| DNA-directed RNA polymerase II complex subunit Rpb11 [Schizosaccharomyces pombe] [NCBI NR]
  • DNA-directed RNA polymerase II complex subunit Rpb11 [Sanger Pombe]
  • (P87123) DNA-directed RNA polymerase II 14.1 kDa polypeptide (EC 2.7.7.6) [Swiss-Prot]
  • DNA-directed RNA polymerase II subunit RPB11 OS=Schizosaccharomyces pombe GN=rpb11 PE=1 SV=1 [Swiss-Prot]
  • DNA-DIRECTED RNA POLYMERASE II 14.1 KD POLYPEPTIDE: P87123; [pompepVF.fasta]
  • DNA-directed RNA polymerase II 14.1 kDa polypeptide (EC 2.7.7.6) [pompep4896]
  • |rpb11||DNA-directed RNA polymerase II 14.1 kD subunit (PMID 9322754) [pompepnew.fasta]
  • |rpb11||DNA-directed RNA polymerase (II subunit) (PMID 9322754)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • dna-directed rna polymerase ii 14.1 kd polypeptide [Schizosaccharomyces pombe]gi|2104423|emb|CAB08752.1| DNA-directed RNA polymerase (II subunit) (PMID 9322754); involved in transcription from Pol II promoter; DNA-directed RNA polymerase activity (functi [nrdb_11152004_Chlamydomonas]
  • |rpb11||DNA-directed RNA polymerase |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • |rpb11||RNA polymerase II complex subunit Rpb11|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC3A12.07 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Rpb11 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • RNA polymerase II subunit Rpb11 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • DNA-directed RNA polymerase II 14.1 kDa polypeptide [nr-271106-contam.fasta]
  • hypothetical protein SPAC3A12.07 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • RNA polymeraseII subunit Rpb11 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |rpb11||DNA-directed RNA polymerase II complex subunit Rpb11|Schizosaccharomyces pombe|chr 1|||Manual [spombe-190209-contam.fasta]
  • DNA-directed RNA polymerase II subunit RPB11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpb11 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 123 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    DNA-directed RNA polymerase II, core complex [IDALink to PubMed article]
    Biological Process: transcription from RNA polymerase II promoter [ICLink to PubMed article]
    Molecular Function: DNA binding [IDALink to PubMed article]
    DNA-directed RNA polymerase activity [IDALink to PubMed article]
    protein binding [IPILink to PubMed article]
    protein dimerization activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQPERYELI ELMGLPKVTY ELDSKSPNAA VVTLEKEDHT LANMLANQLL SDERVLFAGY  60
   61 KVPHPLNHNF ILRVQTVEDC SPKQVIVDAA KSLITHLEEI KVNFMREWEL KMISVEGVEM 120
  121 EFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] PSI-BLAST 34.69897 RPB11


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle