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Protein Overview: rpb9

General Information:
Name(s) found: rpb9 / SPAPYUG7.04c [Sanger Pombe]
Description(s) found:
Found 24 descriptions.
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  • DNA-directed RNA polymerase II complex subunit Rpb9 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 113 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    DNA-directed RNA polymerase II, holoenzyme [TASLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: transcription-coupled nucleotide-excision repair [ISSLink to PubMed article]
    transcription from RNA polymerase II promoter [ICLink to PubMed article]
    Molecular Function: DNA binding [IEA]
    zinc ion binding [IEA]
    DNA-directed RNA polymerase activity [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNFQYCIEC NNMLYPREDK VDRVLRLACR NCDYSEIAAT SKVYRHELQS SNVENTTVSH  60
   61 DASTDPTLPR SDKECPRCHQ HEAVFYQTHS RRGDTMMTLI YVCVHCGFAF EEQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] PSI-BLAST 29.30103 RBP9 subunit of RNA polymerase II


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle