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Protein Overview: rpb3

General Information:
Name(s) found: rpb3 / SPCC1442.10c [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • DNA-directed RNA polymerase II subunit 3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    DNA-directed RNA polymerase II, core complex [IMPLink to PubMed article]
    Biological Process: transcription from RNA polymerase II promoter [ICLink to PubMed article]
    Molecular Function: DNA binding [IDALink to PubMed article]
    DNA-directed RNA polymerase activity [IDALink to PubMed article]
    protein binding [IPILink to PubMed articleLink to PubMed articleLink to PubMed article]
    protein dimerization activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSETHITIR NISKNSVDFV LTNTSLAVAN SLRRVVLAEI PTVAIDLVEI NVNTSVMPDE  60
   61 FLAHRLGMIP LDSSNIDEPP PVGLEYTRNC DCDQYCPKCS VELFLNAKCT GEGTMEIYAR 120
  121 DLVVSSNSSL GHPILADPKS RGPLICKLRK EQEISLRCIA KKGIAKEHAK WSPTSAVAFE 180
  181 YDPWNKLQHT DYWFENDADA EWPKSKNADW EEPPREGEPF NFQEEPRRFY MDVESVGSIP 240
  241 PNEIMVQGLR ILQEKLAVLV RDLDEEQPTQ LSANELNMEE NAEMNWSPYQ NGEENTW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..297] PSI-BLAST 67.221849 RPB3


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle