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Protein Overview: rpl401

General Information:
Name(s) found: rpl401 / SPBC1711.06 [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • 60S ribosomal protein L2 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 363 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    cytosolic large ribosomal subunit [ISSLink to PubMed article]
    Biological Process: translation [ISSLink to PubMed article]
    Molecular Function: structural constituent of ribosome [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAARPTVSI YNKDGSVSSE TLALPFVFKA PIRPDLVRSV HTAVAKNKRQ PYAVSEKAGH  60
   61 QTSAESWGTG RALARIPRVG GGGTHRSGQA AFGNMCRSGR MFAPTKTWRK WHVKVNQNEK 120
  121 RYAIASAVAA SGVPSLLLAR GHRIEEIPEV PLVVDDAVQS FQKTKEAVAL LKEIKAYRDV 180
  181 IKVANSRKLR AGKGKLRNRR HVQRRGPLVV FNEDTGIVKA FRNIPGVEIV NVRRLNLLQL 240
  241 APGGHLGRFV IWTKSAFGLL DSVFGSTTEV AQLKKNYFLP ENIISNADVT RLINSDEIQS 300
  301 IVKAAGPSRV KRAHVQKKNP LKNKAVLSRL NPYAKAYKAN VKINSEKTPK AAGEKFLSVL 360
  361 HEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..363] PSI-BLAST 102.0 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle