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Protein Overview: rpl2403

General Information:
Name(s) found: rpl2403 / SPAC22E12.13c [Sanger Pombe]
Description(s) found:
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  • gi|7490024|pir||T38170 60s ribosomal protein l24-3 (L30) - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|19115751|ref|NP_594839.1| 60S ribosomal protein L24-3 (L30) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|1710534|sp|Q10353.1|RLP24_SCHPO RecName: Full=Ribosome biogenesis protein rlp24 [NCBI NR]
  • gi|1220288|emb|CAA93900.1| 60S ribosomal protein L24-3 (L30) [Schizosaccharomyces pombe] [NCBI NR]
  • 60S ribosomal protein L24-3 (L30) [Sanger Pombe]
  • (Q10353) Ribosome biogenesis protein rlp24 [Swiss-Prot]
  • Ribosome biogenesis protein rlp24 OS=Schizosaccharomyces pombe GN=rlp24 PE=2 SV=1 [Swiss-Prot]
  • 60S RIBOSOMAL PROTEIN L24-3 (L30): Q10353; [pompepVF.fasta]
  • 60S ribosomal protein L24 (L30) [pompep4896]
  • |rpl2403|rpl24-3|60S ribosomal protein L24-3 (L30) [pompepnew.fasta]
  • Ribosome biogenesis protein rlp24 [4896.FASTAC]
  • |rpl2403|rpl24-3|60S ribosomal protein L24-3 (L30)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • 60s ribosomal protein l24-3 (L30) [Schizosaccharomyces pombe]gi|1220288|emb|CAA93900.1| SPAC22E12.13c [Schizosaccharomyces pombe]gi|7490024|pir||T38170 60s ribosomal protein l24-3 (L30) - fission yeast (Schizosaccharomyces pombe)gi|1710534|sp|Q10353|R [nrdb_11152004_Chlamydomonas]
  • |rpl2403|rpl24-3|60S ribosomal protein L24-3 |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q10353) 60S ribosomal protein L24 (L30) [pompep4896_normal_reversed]
  • hypothetical protein SPAC22E12.13c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC22E12.13c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |rlp24||ribosomal L24-like protein involved in ribosome biogenesis Rlp24 |Schizosaccharomyces pombe|chr 1|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Ribosome biogenesis protein rlp24 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rlp24 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 192 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosolic large ribosomal subunit [ISSLink to PubMed article]
    nucleolus [IDALink to PubMed article]
    Biological Process: translation [ISSLink to PubMed article]
    Molecular Function: structural constituent of ribosome [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVHTCYFCS GPVYPGHGIM FVRNDSKVFR FCRSKCHKNF KMKRNPRKVA WTKAYRKAHG  60
   61 KEMVYDTALA VTAARRNVPV RYDRNVIATT LNAMKRVSQV HAKRERLFYK KRLAGKRAQE 120
  121 LQEAQKLIAQ NVPQFTEPEG EVETAEVQEP QIVSDEEYTM EEEVAEPVKI PVLAKKRKNK 180
  181 KSRNSSSAMQ MD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..63] PSI-BLAST 15.69897 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.
    2 View Details [64..192] FFAS03 1.21 crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle