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Protein Overview: rpl1002

General Information:
Name(s) found: rpl1002 / SPAP7G5.05 [Sanger Pombe]
Description(s) found:
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  • gi|7630127|emb|CAB88272.1| 60S ribosomal protein L10 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19115227|ref|NP_594315.1| 60S ribosomal protein L10 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|18203338|sp|Q9P769.1|RL10B_SCHPO RecName: Full=60S ribosomal protein L10-B [NCBI NR]
  • 60S ribosomal protein L10 [Sanger Pombe]
  • (Q9P769) 60s ribosomal protein L10-B [Swiss-Prot]
  • 60S ribosomal protein L10-B OS=Schizosaccharomyces pombe GN=rpl10b PE=2 SV=1 [Swiss-Prot]
  • 60S RIBOSOMAL PROTEIN L10: Q9P769; [pompepVF.fasta]
  • 60s ribosomal protein L10-B [pompep4896]
  • |rpl1002|rpl10-2|60S ribosomal protein L10 [pompepnew.fasta]
  • |rpl1002|rpl10-2|60S ribosomal protein L10|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • 60s ribosomal protein l10 [Schizosaccharomyces pombe]gi|7630127|emb|CAB88272.1| rpl10-2 [Schizosaccharomyces pombe]gi|18203338|sp|Q9P769|RL1B_SCHPO 60s ribosomal protein L10-B [nrdb_11152004_Chlamydomonas]
  • |rpl1002|rpl10-2, rpl10|60S ribosomal protein L10|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAP7G5.05 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAP7G5.05 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • 60S ribosomal protein L10-B [nr-271106-contam.fasta]
  • 60S ribosomal protein L10-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl1002 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 221 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    cytosolic large ribosomal subunit [ISSLink to PubMed article]
    Biological Process: ribosome biogenesis [ISS]
    translation [ISSLink to PubMed article]
    Molecular Function: structural constituent of ribosome [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRPARCYR YCKNKPYPKS RYNRAVPDSK IRIFDLGRKR AGVDEFPLCI HLVSNEYEQI  60
   61 TSEALEAARI CANKYLVKIG GKDSFHLRVR AHPFHVVRIN KMLSCAGADR LQTGMRHAFG 120
  121 KPNGLVARVN IGQVLMSVRT KDSSRATAIE ALRRCQYKFP GQQRIIVSKK WGFSQYARDE 180
  181 YIEKRSRGEI IPDGCYAKFL NKRGSLQEKL DLFPEASFNL A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..221] PSI-BLAST 55.522879 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle