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Protein Overview: SPAC12G12.06c

General Information:
Name(s) found: SPAC12G12.06c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • RNA 3'-terminal phosphate cyclase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 363 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IDALink to PubMed article]
    nucleolus [ISSLink to PubMed article]
    Biological Process: rRNA processing [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTGQLKRFK GCEYLTHRLV LATLSGTPIR VEGIYPDEAD PGVKDYQVSF LRLLEKLTNG  60
   61 SVIEISYTGT SFIYRPGNII GGRVVHDCPT TKGIGYFLEP ILILCLFAKT PTSLTLTGVT 120
  121 SSNEDIGVDV LRTSVLPSLQ KRFQVGDELE LRILKRGSAP GGGGEVNFLC PVIKESLPPI 180
  181 RLSEFGRVFR IRGIASSTRV SPAFANRLVE SARGVLNPFI PDVFIYTDVR RGDECGNSPG 240
  241 YSITLVAETN KGCSYAAEHC GEAGETPEDV GSFCAKKLLE VIESGGCVDP YTQPSTLTGM 300
  301 LLSSEDVNTI VVGQLGITSQ LVVFLRDVKA LFNCEYRFKE LESGQVEMSC LGKGYLNVNR 360
  361 RIQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..363] PSI-BLAST 95.221849 RNA 3'-terminal phosphate cyclase, RPTC, insert domain; RNA 3'-terminal phosphate cyclase, RPTC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.54689525592227 bayes_pls_golite062009
  • transferase activity
    		•  1.7007536630883 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.24131488513793 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle