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Protein Overview: rpl2502

General Information:
Name(s) found: rpl2502 / SPBC4F6.04 [Sanger Pombe]
Description(s) found:
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  • pir||T40501 60s ribosomal protein l25 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|6093882|sp|O74391.1|RL25B_SCHPO RecName: Full=60S ribosomal protein L25-B [NCBI NR]
  • gi|3560137|emb|CAA20724.1| 60S ribosomal protein L25 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112896|ref|NP_596104.1| 60S ribosomal protein L25 [Schizosaccharomyces pombe] [NCBI NR]
  • 60S ribosomal protein L25 [Sanger Pombe]
  • 60S ribosomal protein L25-B OS=Schizosaccharomyces pombe GN=rpl25b PE=2 SV=1 [Swiss-Prot]
  • (O74391) 60S ribosomal protein L25-B [Swiss-Prot]
  • 60S RIBOSOMAL PROTEIN L25: O74391; [pompepVF.fasta]
  • 60S RIBOSOMAL PROTEIN L25.: O74391; [pompepV13]
  • 60S ribosomal protein L25-B [pompep4896]
  • |rpl2502|rpl25b, rpl23a-2|60S ribosomal protein L25 [pompepnew.fasta]
  • |rpl2502|rpl25b, rpl23a-2|60S ribosomal protein L25|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • 60s ribosomal protein l25. [Schizosaccharomyces pombe]gi|3560137|emb|CAA20724.1| rpl23a-2 [Schizosaccharomyces pombe]gi|7490025|pir||T40501 60s ribosomal protein l25 - fission yeast (Schizosaccharomyces pombe)gi|6093882|sp|O74391|R25B_SCHPO 60S riboso [nrdb_11152004_Chlamydomonas]
  • hypothetical protein SPBC4F6.04 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC4F6.04 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |rpl2502|rpl25b, rpl23a-2|60S ribosomal protein L25 |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • 60S ribosomal protein L25-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl2502 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 141 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    cytosolic large ribosomal subunit [ISSLink to PubMed article]
    Biological Process: ribosomal large subunit assembly [ISS]
    translation [ISSLink to PubMed article]
    Molecular Function: RNA binding [IEA]
    structural constituent of ribosome [ISSLink to PubMed article]
    rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVGKAKGAQ KTVQKGIHNK VARKVRTSTT FRRPKTLELA RKPKYARKSV PHASRLDEYK  60
   61 IIVNPINSES AMKKIEDDNT LVFHVHLKAN KFTIKNAVKK LYSVDAVKIN TLIRPNGTKK 120
  121 AFVKLSADAD ALDVANRIGF L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run ste13 No Comments Unpublished Data

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] PSI-BLAST 38.221849 No description for 2go54 was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle