YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: rps1701

General Information:
Name(s) found: rps1701 / SPBC839.05c [Sanger Pombe]
Description(s) found:
SHOW ONLY BEST
  • pir||T40712 40s ribosomal protein S17 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|6094162|sp|O42984.1|RS17A_SCHPO RecName: Full=40S ribosomal protein S17-A [NCBI NR]
  • gi|5441468|emb|CAB46698.1| 40S ribosomal protein S17 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112037|ref|NP_595245.1| 40S ribosomal protein S17 [Schizosaccharomyces pombe] [NCBI NR]
  • 40S ribosomal protein S17 [Sanger Pombe]
  • 40S ribosomal protein S17-A OS=Schizosaccharomyces pombe GN=rps17a PE=2 SV=1 [Swiss-Prot]
  • (O42984) 40S ribosomal protein S17-A [Swiss-Prot]
  • 40S RIBOSOMAL PROTEIN S17: ;N0ACC; [pompepVF.fasta]
  • 40S ribosomal protein S17-A [pompep4896]
  • |rps1701|rps17-1|40S ribosomal protein S17 [pompepnew.fasta]
  • |rps1701|rps17-1|40S ribosomal protein S17|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • 40s ribosomal protein S17 [Schizosaccharomyces pombe]gi|5441468|emb|CAB46698.1| SPBC839.05c [Schizosaccharomyces pombe]gi|7489977|pir||T40712 40s ribosomal protein S17 - fission yeast (Schizosaccharomyces pombe)gi|6094162|sp|O42984|R17A_SCHPO 40S ribo [nrdb_11152004_Chlamydomonas]
  • SPBC24E9.05c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • 40S ribosomal protein S17 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |rps1701|rps17-1|40S ribosomal protein S17 |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • 40S ribosomal protein S17-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rps1701 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 131 amino acids

    Gene Ontology:
    Cellular Component: cytosolic small ribosomal subunit [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: ribosome biogenesis [ISS]
    translation [ISSLink to PubMed article]
    Molecular Function: structural constituent of ribosome [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRVRTKTTK RASRVVIEKY YPRLTLDFQT NKRIVDEVAI IASKRLRNKI AGYTTHLMKR  60
   61 IQRGPVRGIS FKLQEEERER KDQYVPEVSE LEVDRVNVDQ DTKDMLKSLG YDQIPVRVLA 120
  121 PAPQERFRRR Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)
    View Run None Entered Lid1-TAP APC complex on iontrap. Unpublished Data

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..66] PSI-BLAST 16.69897 Solution structure of ribosomal protein S17E from Methanobacterium Thermoautotrophicum, Northeast Structural Genomics Consortium Target TT802 / Ontario Center for Structural Proteomics Target Mth0803
    2 View Details [67..131] Pfam 3.619789 No description for PF00833.9 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleic acid binding
    		•  0.644832948797119 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle