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Protein Overview: psy1

General Information:
Name(s) found: psy1 / SPCC825.03c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • SNARE Psy1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: prospore membrane [IDALink to PubMed article]
    integral to membrane [IEA]
    Golgi apparatus [IDALink to PubMed article]
    plasma membrane [IDALink to PubMed article]
    Biological Process: ascospore formation [IGILink to PubMed article]
    vesicle-mediated transport [ICLink to PubMed article]
    ascospore-type prospore formation [IGILink to PubMed article]
    Molecular Function: SNAP receptor activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKANDYTLG VEMIPLSMGE FFEEIDHIRD AIRQIEDNVG RIEMLHQQSL QEIDEANIAA  60
   61 TTRHLEGYTS DTRRLQTSVQ LAIRSLESQN MQLPPDNDTA TRKTQTEAVK KKFMDQIRHF 120
  121 LQIEKTYRAQ YEQRMRRQLE IANPRATEDD FQTAINEENG GQVFAQALLR SNRSGEARTA 180
  181 LREVQERHAD IKRIERTIAE LAQLFQDMAT MVQEQEPMVD KIVTDAVNVR TNMGEGTQHM 240
  241 DRAIKSARAA RKKKWICFGI CVVIICVIVA VLCGVLIPVL GNRH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..284] PSI-BLAST 41.30103 Syntaxin 1A N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphatidic acid binding
    		•  8.51970136264329 bayes_pls_golite062009
  • SNAP receptor activity
    		•  3.50393203740159 bayes_pls_golite062009
  • binding
    		•  1.8951551921267 bayes_pls_golite062009
  • transporter activity
    		•  1.74189664015129 bayes_pls_golite062009
  • protein binding
    		•  1.63976398283458 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.2360389745429 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.13101548288086 bayes_pls_golite062009
  • SNARE binding
    		•  1.11364909435982 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.398018181744571 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.0981818568206971 bayes_pls_golite062009
  • phospholipid binding
    		•  0.0172309833091902 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle