YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	psy1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKANDYTLG VEMIPLSMGE FFEEIDHIRD AIRQIEDNVG RIEMLHQQSL QEIDEANIAA  60
   61 TTRHLEGYTS DTRRLQTSVQ LAIRSLESQN MQLPPDNDTA TRKTQTEAVK KKFMDQIRHF 120
  121 LQIEKTYRAQ YEQRMRRQLE IANPRATEDD FQTAINEENG GQVFAQALLR SNRSGEARTA 180
  181 LREVQERHAD IKRIERTIAE LAQLFQDMAT MVQEQEPMVD KIVTDAVNVR TNMGEGTQHM 240
  241 DRAIKSARAA RKKKWICFGI CVVIICVIVA VLCGVLIPVL GNRH

Type	Start	End	Confidence
Cytoplasmic	1	254	0.99
Transmembrane Helix	255	279	0.93
Non-Cytoplasmic	280	284	0.87