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Protein Overview: pop2

General Information:
Name(s) found: pop2 / SPAC4D7.03 [Sanger Pombe]
Description(s) found:
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  • gi|3293383|gb|AAC39496.1| proteolysis factor Sud1p [Schizosaccharomyces pombe] [NCBI NR]
  • gi|3183124|sp|O14170.1|POP2_SCHPO RecName: Full=WD repeat-containing protein pop2; AltName: Full=Proteolysis factor sud1 [NCBI NR]
  • gi|2766702|gb|AAB95480.1| F-box/WD-repeat protein Pop2p [Schizosaccharomyces pombe] [NCBI NR]
  • gi|2330806|emb|CAB11275.1| F-box/WD repeat protein Pop2 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19115868|ref|NP_594956.1| F-box/WD repeat protein Pop2 [Schizosaccharomyces pombe] [NCBI NR]
  • pir||T43557 F-box/WD-repeat protein pop2 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • F-box/WD repeat protein Pop2 [Sanger Pombe]
  • WD repeat-containing protein pop2 OS=Schizosaccharomyces pombe GN=pop2 PE=1 SV=1 [Swiss-Prot]
  • F-BOX/WD REPEAT PROTEIN; PROTEOLYSIS FACTOR; SIMILAR TO S. CEREVISIE CDC4: O14170; [pompepVF.fasta]
  • F-BOX/WD-REPEAT PROTEIN; PROTEOLYSIS FACTOR: O14170; [pompepV13]
  • WD-repeat protein pop2 (Proteolysis factor sud1) [pompep4896]
  • |pop2|sud1|F-box protein [pompepnew.fasta]
  • |pop2|sud1|F-box protein|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • wd-repeat protein pop2; proteolysis factor sud1p [Schizosaccharomyces pombe]gi|2330806|emb|CAB11275.1| SPAC4D7.03 [Schizosaccharomyces pombe]gi|3183124|sp|O14170|POP2_SCHPO WD-repeat protein pop2 (Proteolysis factor sud1)gi|11359054|pir||T43557 F-box/W [nrdb_11152004_Chlamydomonas]
  • (O14170) WD-repeat protein pop2 (Proteolysis factor sud1) [pompep4896_normal_reversed]
  • |pop2|sud1|F-box/WD repeat protein Pop2|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC4D7.03 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • WD repeat protein pop2 (Proteolysis factor sud1) [nr-271106-contam.fasta]
  • proteolysis factor Sud1p [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC4D7.03 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • F-box/WD-repeat protein Pop2p [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • WD repeat-containing protein pop2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pop2 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 703 amino acids

    Gene Ontology:
    Cellular Component: nuclear SCF ubiquitin ligase complex [IDALink to PubMed article]
    Biological Process: ubiquitin-dependent protein catabolic process [TASLink to PubMed article]
    Molecular Function: identical protein binding [IPILink to PubMed article]
    protein binding [IPILink to PubMed articleLink to PubMed article]
    protein binding, bridging [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSRCPTDN SSSRINSSVP LINSSSPATP PESFDPQVFP SSLIHGDNLL PQDDQIASDP  60
   61 RSESNSCNGN TSSSLPCTDS YQYPLKHSCT PSFLRKFNES IENVSYKCLD HSPPDSVPGD 120
  121 FSISLVPQRN FLYSHSSLPP KIISIDRNNR IKLDNSISSN SDNFPPSPKV DTSNTVSPGS 180
  181 KPISEDLEDL NLQSIVQTFE DLPEGIQSYA FFQLLRSCNR QSMRLLLNEC EPLLKKDILS 240
  241 NLPFSIVQSI LLNLDIHSFL SCRLVSPTWN RILDVHTSYW KHMFSLFGFQ INENDWKYAN 300
  301 PNLNRPPFLH NDQISDDYFP EIFKRHFLNR KRWLFPSIPP SHLSFPIHVP NFMITSLLLH 360
  361 KDRIITTSGS GTIQIHNAIT GVLEARLEGH KEGVWAVKIH ENTLVSGSID KTVRVWNIEK 420
  421 AKCTHIFRGH ISIIRCLEIL VPSRLIRHGV EIVEPDQPYI VSGSRDHTLR VWKLPKNTDP 480
  481 PYLPDNTNSI DRWEKNPYFV HTLIGHTDSV RTISGYGDIL VSGSYDSSIR IWRVSTGECL 540
  541 YHLRGHSLRI YSVLYEPERN ICISGSMDKS IRVWDLSTGT CKYVLEGHDA FVTLLNVFQN 600
  601 RLISGSADST IRIWDLNTGK PLMVLPSNSG YISSFVSDEH KIISGNDGSV KLWDVRTGKL 660
  661 LRFLLTDLTK IWHVDFDAMR CVAAVQRDDQ AYLEVINFSG SRP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] MSA 5.188996 View MSA. No confident structure predictions are available.
    2 View Details [127..219] deduced N/A No confident structure predictions are available.
    3 View Details [220..703] PSI-BLAST 75.30103 Cdc4 F-box and linker domains; Cdc4 propeller domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle