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Protein Overview: pof12

General Information:
Name(s) found: pof12 / SPBC56F2.01 [Sanger Pombe]
Description(s) found:
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  • pir||T40543 hypothetical protein SPBC56F2.01 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|3116131|emb|CAA18880.1| F-box protein Pof12 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|20138882|sp|O60053.1|POF12_SCHPO RecName: Full=F-box protein pof12 [NCBI NR]
  • gi|19113508|ref|NP_596716.1| F-box protein Pof12 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|14141678|dbj|BAB55637.1| F-box protein Pof12 [Schizosaccharomyces pombe] [NCBI NR]
  • F-box protein Pof12 [Sanger Pombe]
  • (O60053) F-box protein pof12 [Swiss-Prot]
  • F-box protein pof12 OS=Schizosaccharomyces pombe GN=pof12 PE=1 SV=1 [Swiss-Prot]
  • F-BOX PROTEIN: O60053; [pompepVF.fasta]
  • F-BOX PROTEIN: BAB55637;O60053; [pompepV13]
  • F-box protein pof12 [pompep4896]
  • |pof12||F-box protein [pompepnew.fasta]
  • |pof12||F-box protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • F-box protein; no apparent orthologs (cannot be distinguished) [Schizosaccharomyces pombe]gi|19113508|ref|NP_596716.1| hypothetical protein [Schizosaccharomyces pombe]gi|20138882|sp|O60053|POFC_SCHPO F-box protein pof12gi|7491698|pir||T40543 hypothetic [nrdb_11152004_Chlamydomonas]
  • |pof12||F-box protein Pof12|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC56F2.01 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • F-box protein Pof12 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC56F2.01 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • F-box protein pof12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pof12 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 440 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    ubiquitin ligase complex [ISSLink to PubMed article]
    Biological Process: protein ubiquitination [ISSLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]
    protein binding, bridging [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTDVKAKNP ASIFSHETLL HVLNDLSAHD LAALERVSRS WNSIVRRSSV WHNLYLSEFG  60
   61 TKHLRRHGRI EKKRRNWKGL FRRQSNWKDG RCKKVESMLP QLLNSEKSVG EDRLGLTLTH 120
  121 QNNIYFCNDV QISKWSSVGN SLKCQAISSF RDETVKSGPA VMCLDNASLY IGLKDGNLLH 180
  181 VTVHETGFGN IENLATFSTK FVALSSHKNY ICGLTNDNNL YILQHSHQAG TKLKVLGKYH 240
  241 VSSIEKQVAI HFQQSKEGYE VVHVVFNDYV LSGGWTVSLQ EFVFNEYCVK SSRLALHDNK 300
  301 DIEYSQQPAS AIFMYGSYIL TSHPDNSLIL QRLYSTNNEL RIKFLGRLLG HVCGVQISKL 360
  361 FSCGRIVSVS KNCADICVWD LHDTNYQSIV SPLMLTCTNI HNKPVSDYEK ECKVQDIGLY 420
  421 EDTILITLSD GRILKFLFNI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..440] PSI-BLAST 42.69897 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle