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Protein Overview: pmc2

General Information:
Name(s) found: pmc2 / SPAC2F7.04 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • RNA polymerase II holoenzyme mediator complex subunit [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 454 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    mediator complex [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: gene-specific transcription from RNA polymerase II promoter [ICLink to PubMed article]
    regulation of transcription from RNA polymerase II promoter [IEA]
    Molecular Function: RNA polymerase II transcription mediator activity [ICLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRPHLFSEV HFRRNASNPN QINWTRYWID CLSSVPWNDI SVTGFEYLAK KYGLEVFQDS  60
   61 SKPNEVVLSL AGKIILIDIT VPINASPKDI NVVLAFANAS GEQYNNPVAE KLLKDAIYNC 120
  121 NTPLFEKNVK WLATFDHSSP SVQQSCFQYL DSLSSSLNAI YEAELSLLAQ EENVIMHGNG 180
  181 KPLSNYEGQL GLRIVYWKLL DKTYSTQIFM DNLSHESLPH LLFGYNLLNS PPILQSSKIN 240
  241 WALENTLTPI PTTMELVFDD INLIIPEQGV KPLLDLLHVH DITIPWPVQN YSHMLGLPSK 300
  301 STVNYKFINK NQAIQLTGFD VSARSLRHVP FHHPKQIRGI LAIVRQYLLL QLILENIKSA 360
  361 DLAETAASSS LHLSLYFKEH PIVHAQYQEI NKLNNSEQII IVLSVLSDGR LNVDYMSSGG 420
  421 KELSKQQSHV FQKLIQQTCN IGLAIEVFIK KVVN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..237] deduced N/A No confident structure predictions are available.
    2 View Details [238..329] deduced N/A No confident structure predictions are available.
    3 View Details [330..454] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle