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Protein Overview: plr1

General Information:
Name(s) found: plr1 / SPAC9E9.11 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • pyridoxal reductase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 333 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: cellular response to stress [IEPLink to PubMed article]
    pyridoxal biosynthetic process [IMPLink to PubMed article]
    Molecular Function: pyridoxine 4-dehydrogenase activity [IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIVSGFKVG PIGFGLMGLT WKPKQTPDEE AFEVMNYALS QGSNYWDAGE FYGVDPPTSN  60
   61 LDLLARYFEK YPENANKVFL SVKGGLDFKT LVPDGNPDFV SKSVENVIAH LRGTKKLDLF 120
  121 QCARVDPNVP IETTMKTLKG FVDSGKISCV GLSEVSAETI KRAHAVVPIA AVEVEYSLFS 180
  181 RDIETNGIMD ICRKLSIPII AYSPFCRGLL TGRIKTVEDL KEFAKSFPFL EYLDRFSPDV 240
  241 FAKNLPFLQA VEQLAKKFGM TMPEFSLLFI MASGNGLVIP IPGSTSVSRT KSNLNALNKS 300
  301 LSPEQFKEAK EVLSKYPIYG LRYNEQLAGT LSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..333] PSI-BLAST 70.30103 Structure of NADPH-dependent family 11 aldo-keto reductase AKR11B(holo)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aldo-keto reductase activity
    		•  3.79117514230146 bayes_pls_golite062009
  • pyridoxine 4-dehydrogenase activity
    		•  3.25535446462297 bayes_pls_golite062009
  • aryl-alcohol dehydrogenase activity
    		•  2.5168190536972 bayes_pls_golite062009
  • aldehyde reductase activity
    		•  2.19831490122079 bayes_pls_golite062009
  • catalytic activity
    		•  1.68179794468736 bayes_pls_golite062009
  • binding
    		•  0.750554688914866 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.409822872480823 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.0465377885825481 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.0143508436041874 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.56

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle