YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPAC5H10.09c

General Information:
Name(s) found: SPAC5H10.09c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • 3-methyl-2-oxobutanoatehydroxymethyltransferase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 267 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: pantothenate biosynthetic process [ISSLink to PubMed article]
    Molecular Function: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKQITIST LRQWKLANKK FACITAYDAS FSRLFAEQGM PVMLVGDSLG MTAQGHSTTL  60
   61 PVSVEDIAYH TKSVRRGAPN RLLMADLPFM SYSTWEDACK NAATVMRAGA NIVKIEGGGN 120
  121 WIFEIVQRLT ERSVPVAGHL GLTPQSVNIF GGYKIQGREQ SAAARLIENA QQLEKFGAQL 180
  181 LVLECIPESL AEQITKTISI PTIGIGAGKH TDGQILVMHD ALGITGGRPP KFAKNFLSGA 240
  241 GDIRTAIQRY IYEVEQGLYP AEEHSFQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..267] PSI-BLAST 117.0 Ketopantoate hydroxymethyltransferase PanB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
    		•  4.08693637310631 bayes_pls_golite062009
  • catalytic activity
    		•  2.59838799615646 bayes_pls_golite062009
  • hydroxymethyl-, formyl- and related transferase activity
    		•  2.05689968523792 bayes_pls_golite062009
  • transferase activity
    		•  1.07154136609184 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.646649320021871 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.366715189574293 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  0.0960362356555544 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.0846611486307003 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle