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Protein Overview: SPAC5H10.10

General Information:
Name(s) found: SPAC5H10.10 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • NADPH dehydrogenase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: generation of precursor metabolites and energy [RCALink to PubMed article]
    Molecular Function: FMN binding [IEA]
    NADPH dehydrogenase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVQKLYESQ SKLFQPIKVG NMQLQHRMVH APATRLRCLD NGLVMTDLVK EYYKQRSSIP  60
   61 GTLLITESLF SGAKSGGFSN IPCLYNDEHV EAWKPIVQAI HDNDCFVFIQ FWNLPGELKV 120
  121 DYLEDQERLE KVTQGECPMD PTGLPAALGS AYSICGEELY VDKFMTKQDI QEHITTYTEA 180
  181 AKRAVFGCGA DGVEVHQVNG FLLDKFVLNG YGDKCDPEYC GSLENRARFC LELLESVVNA 240
  241 IGQERVGYRI SPFSDIWKDK DSFEAHVFMI KKIKERFPNL AYLHAIEPRQ YWNGHVHITQ 300
  301 EKNTLIYKNL WGDPFITAGG HDRDSAIQMA EQENTLVAFG RYFLSNPDLP FRLKYNLPLN 360
  361 KWDRATFYTK MSPKGYIDYP FSKEFLDTKK VE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..392] PSI-BLAST 101.0 Gene Product of At1g76680 from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  3.50791144647902 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  2.11027907327307 bayes_pls_golite062009
  • catalytic activity
    		•  1.94749091175302 bayes_pls_golite062009
  • coenzyme binding
    		•  0.99234662301893 bayes_pls_golite062009
  • binding
    		•  0.724672865863266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.350068675013616 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.0276497014195508 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle