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Protein Overview: SPAC5H10.04

General Information:
Name(s) found: SPAC5H10.04 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • NADPH dehydrogenase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 382 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: FMN binding [IEA]
    NADPH dehydrogenase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDRGELFKP IKVGNMLLQH RIVHAPMTRL RATDYGKITG LMVEYYSQRS MIPGTLLIAD  60
   61 ATFVGEKSGG FPNNPRCFTK EQAESWIPLV EAVHKNKSFL FIQFWPLPGD LKDEYRNDLE 120
  121 KMQKITYSDC PQDPGGLPAG IHSFDAVQGV EVYKKKYMSK RDIQEHIQDF VNAADLAVNI 180
  181 AKADGVEIHQ VNGFLLDRFV LGGFGDQCDP EYRGSIENRC RFPLEVLEAV TRKIGQERVG 240
  241 YRISPFSGWM QKIDFMEVNI YLMSEIAKRF PKLAYIHAIE PRKYWSGHKL VSSEQNTSFL 300
  301 QKYWKGPFIT AGGYDPETAV QAANERGVLV AFGRNFIANP DLVFRIKHHI PLNKWDRSSF 360
  361 YLPKTEKGYT DYPFSKEFLQ SK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..382] PSI-BLAST 102.0 Gene Product of At1g76680 from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  3.50791144647902 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  2.11027907327307 bayes_pls_golite062009
  • catalytic activity
    		•  1.94749091175302 bayes_pls_golite062009
  • coenzyme binding
    		•  0.99234662301893 bayes_pls_golite062009
  • binding
    		•  0.724672865863266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.350068675013616 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.0276497014195508 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle