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Protein Overview: SPBC4C3.04c

General Information:
Name(s) found: SPBC4C3.04c [Sanger Pombe]
Description(s) found:
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  • gi|7492634|pir||T40494 probable guanine nucleotide exchange factor - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|2832884|emb|CAA16825.1| guanyl-nucleotide exchange factor (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|20138877|sp|O43057.1|MSS4_SCHPO RecName: Full=Guanine nucleotide exchange factor MSS4 homolog [NCBI NR]
  • gi|19113094|ref|NP_596302.1| guanyl-nucleotide exchange factor (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • guanyl-nucleotide exchange factor [Sanger Pombe]
  • Guanine nucleotide exchange factor MSS4 homolog OS=Schizosaccharomyces pombe GN=SPBC4C3.04c PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE GUANINE NUCLEOTIDE EXCHANGE FACTOR; PUTATIVE YEAST DSS4 HOMOLOG- GUANINE-NUCLEOTIDE EXCHANGE FACTOR FOR SEC4P: O43057; [pompepVF.fasta]
  • PUTATIVE GUANINE NUCLEOTIDE EXCHANGE FACTOR; POSSIBLE YEAST DSS4 HOMOLOG- GUANINE-NUCLEOTIDE EXCHANGE FACTOR FOR SEC4P: O43057; [pompepV13]
  • Guanine nucleotide exchange factor MSS4 homolog [pompep4896]
  • |||putative guanine nucleotide exchange factor [pompepnew.fasta]
  • |||guanyl-nucleotide exchange factor activity (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • putative guanine nucleotide exchange factor [Schizosaccharomyces pombe]gi|2832884|emb|CAA16825.1| SPBC4C3.04c [Schizosaccharomyces pombe]gi|20138877|sp|O43057|MSS4_SCHPO Guanine nucleotide exchange factor MSS4 homologgi|7492634|pir||T40494 probable gua [nrdb_11152004_Chlamydomonas]
  • |||guanyl-nucleotide exchange factor activity |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O43057) Guanine nucleotide exchange factor MSS4 homolog [pompep4896_normal_reversed]
  • |||guanyl-nucleotide exchange factor |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC4C3.04c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC4C3.04c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Guanine nucleotide exchange factor MSS4 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC4C3.04c PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 100 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: small GTPase mediated signal transduction [ICLink to PubMed article]
    regulation of catalytic activity [ICLink to PubMed article]
    post-Golgi vesicle-mediated transport [ISSLink to PubMed article]
    Molecular Function: zinc ion binding [ISSLink to PubMed article]
    guanyl-nucleotide exchange factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLRIVCQH CPSVVFNNKR PDVVKRPTMS AMLHSETQED LETDDFFLLK DPFAFDNVSV  60
   61 SKPLANNYKL LACADCEKGP LGYYDSKNNE YLLLCSLEKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..100] PSI-BLAST 27.69897 No description for 2fu5A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.36438138191491 bayes_pls_golite062009
  • GTPase regulator activity
    		•  1.2447728025682 bayes_pls_golite062009
  • nucleoside-triphosphatase regulator activity
    		•  1.22386653092425 bayes_pls_golite062009
  • guanyl-nucleotide exchange factor activity
    		•  0.965822802580955 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.656440922856329 bayes_pls_golite062009
  • protein binding
    		•  0.072370908138261 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle