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Protein Overview: SPBC8D2.15

General Information:
Name(s) found: SPBC8D2.15 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • mitochondrial lipoic acid synthetase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 370 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: lipoate biosynthetic process [ISSLink to PubMed article]
    Molecular Function: iron ion binding [IEA]
    lipoate synthase activity [ISSLink to PubMed article]
    4 iron, 4 sulfur cluster binding [IEA]
    iron-sulfur cluster binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKIGRNATI LKNNFWFASV RFQSGGFSEK LAKGPSFADF LNMDKPLTAD EAFELDRKVE  60
   61 LPNGSIHKRL PSWLKTKVPL GTNFNRIKHD LRGSHLHTVC EEAKCPNIGE CWGGKDKSRA 120
  121 TATIMLMGDT CTRGCRFCSV KTSRRPGPLD PNEPENTAEA IKQWNLGYIV LTSVDRDDLT 180
  181 DLGANHIAKT IQKIKEKAPH ILVEALTPDF SGRMDLVEIV AKSGLDVFAH NVETVEELTP 240
  241 FVRDRRATYR QSLSVLKHVK KTCPHLITKT SIMLGLGETD AEILTTLKDL LEHNVDVVTF 300
  301 GQYMRPTKRH LKVQEYVHPK KFEYWKEVAE KLGFLYVASG PLVRSSYKAG EYFMENLIKK 360
  361 RSGNPASMSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..370] PSI-BLAST 45.0 The Crystal Structure of Biotin Synthase, an S-Adenosylmethionine-Dependent Radical Enzyme

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • sulfurtransferase activity
    		•  2.16438226990481 bayes_pls_golite062009
  • biotin synthase activity
    		•  2.08611410724267 bayes_pls_golite062009
  • coproporphyrinogen oxidase activity
    		•  1.98937742831419 bayes_pls_golite062009
  • radical SAM enzyme activity
    		•  1.93582371651697 bayes_pls_golite062009
  • catalytic activity
    		•  1.48331922124015 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
    		•  1.37188743230327 bayes_pls_golite062009
  • transferase activity, transferring sulfur-containing groups
    		•  1.13381681474815 bayes_pls_golite062009
  • binding
    		•  0.998331252589966 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.593156857804038 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  0.48341859452689 bayes_pls_golite062009
  • protein binding
    		•  0.274298596808905 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle