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Protein Overview: SPBC1271.15c

General Information:
Name(s) found: SPBC1271.15c [Sanger Pombe]
Description(s) found:
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  • pir||T39351 translation initiation factor IF-2 precursor, mitochondrial - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|6016315|sp|O59683.1|IF2M_SCHPO RecName: Full=Translation initiation factor IF-2, mitochondrial; Short=IF-2Mt; Short=IF2(mt); Short=IF-2(Mt); Flags: Precursor [NCBI NR]
  • gi|3925784|emb|CAA22205.1| mitochondrial translation initiation factor IF-2Mt [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19111927|ref|NP_595135.1| translation initiation factor IF-2Mt [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • translation initiation factor IF-2Mt [Sanger Pombe]
  • Translation initiation factor IF-2, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC1271.15c PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIAL: O59683; [pompepVF.fasta]
  • PUTATIVE TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIAL PRECURSOR: O59683; [pompepV13]
  • Translation initiation factor IF-2, mitochondrial precursor (IF-2Mt) (IF-2(Mt)) [pompep4896]
  • |||putative translation initiation factor if-2, mitochondrial [pompepnew.fasta]
  • |||translation initiation factor if-2 (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • |||translation initiation factor if-2|Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • putative translation initiation factor if-2, mitochondrial precursor [Schizosaccharomyces pombe]gi|3925784|emb|CAA22205.1| SPBC1271.15c [Schizosaccharomyces pombe]gi|6016315|sp|O59683|IF2M_SCHPO Translation initiation factor IF-2, mitochondrial precurso [nrdb_11152004_Chlamydomonas]
  • (O59683) Translation initiation factor IF-2, mitochondrial precursor (IF-2Mt) (IF-2(Mt)) [pompep4896_normal_reversed]
  • |||mitochondrial translation initiation factor IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • translation initiation factor if-2 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC1271.15c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |||mitochondrial translation initiation factor IF-2Mt |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Translation initiation factor IF-2, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.15c PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 686 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: positive regulation of translational initiation [ICLink to PubMed article]
    mitochondrial translation [RCALink to PubMed article]
    translational initiation [ISSLink to PubMed article]
    Molecular Function: GTP binding [ICLink to PubMed article]
    translation initiation factor activity [ISSLink to PubMed article]
    RNA binding [ISSLink to PubMed article]
    GTPase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFLSACTSW RHVHNAGFTF ITKFPFVRNV HKLSYHISPL SSRFSLADIS VKENNHPNGP  60
   61 QLRLQTHFFH SSSPMHATKG FRFPKSSTPL TLPAVLSVAS FANLLQIPTR RILRDLNRLG 120
  121 IKDVFPEYLI TYEYSSLLAE EYGFDVQEAA AYSAPSPKSL NSKKDSGPLR PPVVTLMGHV 180
  181 DHGKTTLLDA FRKSTIASTE HGGITQKIGA FTVPFDKGSK FITFLDTPGH MAFEAMRKRG 240
  241 ANIADIVVLV VAGDDGVKPQ TVEAIKHIQS ADVPVVVALT KSDRPGTPIH KIYEQLLNNG 300
  301 IQVEALGGET QIIPISAKTG KGIPELEAAI LTLAEIMEIR ASPRDPFQGW IVESSVTKGV 360
  361 GSSATVVVKR GTVKKGMYLV AGKSWCKVRS LVDVNKKSIK QVLPGQAAQV YGWKDLPIAG 420
  421 DLAYEVKSES EAKRILSDIY RQSNEQNFYE LAESQNEQRV SALAAKKSGP AAIQEETSVS 480
  481 KSFNIIAKCE DTGSMEALSD YLKPLQFGKV KSRVLYTGVG PVTETDIERA ETSDAIIISF 540
  541 GVSVPKATFR LAEKHNVKLL FHNVIYHLMD DVRKLFALRL PPILVQRVTG EAIISAIFDI 600
  601 KAKRAVVHVA GCRVTNGTIE KSHKIRLVRN DKIIWSGEID SLKHLKEEVT SIKKGRECGI 660
  661 LLKNFDEIVT GDKLQTFVEE YKPPDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] PSI-BLAST 12.39794 No description for 2e87A was found.
    2 View Details [167..686] PSI-BLAST 100.0 IF2, IF1, and tRNA fitted to cryo-EM data OF E. COLI 70S initiation complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle