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Protein Overview: hip1

General Information:
Name(s) found: hip1 / SPBC31F10.13c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • hira protein Hip1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 932 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    nuclear chromatin [ICLink to PubMed article]
    cytosol [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    Biological Process: chromatin modification [IEA]
    negative regulation of transcription from RNA polymerase II promoter, mitotic [IMPLink to PubMed article]
    chromatin silencing at centromere [IMPLink to PubMed article]
    chromosome segregation [IMPLink to PubMed article]
    DNA replication-independent nucleosome assembly [TASLink to PubMed article]
    chromatin silencing at silent mating-type cassette [IMPLink to PubMed article]
    regulation of mitotic cell cycle [IMPLink to PubMed article]
    cellular response to nitrogen starvation [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed articleLink to PubMed articleLink to PubMed article]
    transcription corepressor activity [TASLink to PubMed article]
    chromatin binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIKKIPWLG HFDDRGHRLS IFSIHIHPDG SRIATGGLDG TIRIWSTEAI NRENENENEN  60
   61 EDLPKQLCCM STHTGTVTSV RFSPNGQYLA SGSDDRVVII WHKEEAIPGL GSTFGSGEKH 120
  121 TENWRSYRRL LGHDNDIQDL CWSYDSQLVV SVGLDSSIIV WNGTTFERLK RIEAHQSHVK 180
  181 GITFDPAGKY FATESDDRTI KVWRVSDFSI EKTITGPFNN SPLSTYFRRP SWSPDGKHIA 240
  241 APNAMNGPVS CVSIIERGTW TSEINLIGHE GPVEVTAFNP KLFRDKNDKL VCILACGGQD 300
  301 RSLSIWSSAL PRPLLSCQNV FQKSIGDVCW SPDGLSLFLC SYDGNVLVCT FEKEEFGDMV 360
  361 SDEEISKALA KYGHGRHGIV LPESAKQLEL EETAYAILKK PSSLSTTDPT LVPQSSSTPK 420
  421 SAQKTPQKLP AFLPNRLTAE TVDTNKLTAS KEQIASPKRP GPSDNGNEIP TKFVQKVTIT 480
  481 KEGKKRVAPQ LLTTLSATPS TSRLASTQLQ HTGSSQLPPQ QFSQPINSLP KGGVPILIVG 540
  541 NKTKVNHEND ESDQALQEEK IEEGLLKNYY SSLIDSSTSI SNINFEAPRY KTNIVHSLNN 600
  601 EQKYVLEVKN GTSEKNPTRI VALENGNTKW MDYLPRPVIL VTGSIHFWSI ACDDGSLHLY 660
  661 SLTGSRLLPP IMIESKASFL HCNNAYLLCI SSSGMVYAWN VVNKTALFTA NSLAPILSRV 720
  721 SNNVTIENNS TDIPHVVIAS ISKEGVPSVT LSTGETYVYS STMLCWQRIT EPWWAIGSRE 780
  781 WDSSGLLQSN TQTESQPLKI YEHRTNNVLM DSGRGKLLQK MVADAITEEG YDDFETIVTI 840
  841 NHLENKIASA RLLKLDDEFL VTSEVYVRLL MHHGLWQKLE EFLGELRTQT KCSIKLSGRE 900
  901 VVAKMLVVLR QAVQTDNEFD RANKLIEKYA ST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] PSI-BLAST 70.154902 No description for 2gnqA was found.
    2 View Details [133..361] FFAS03 6.6 No description for 2gnqA was found.
    3 View Details [362..434] PSI-BLAST 44.522879 F-box/WD-repeat protein 1 (beta-TRCP1)
    4 View Details [435..578] deduced N/A No confident structure predictions are available.
    5 View Details [579..710] deduced N/A No confident structure predictions are available.
    6 View Details [711..796] deduced N/A No confident structure predictions are available.
    7 View Details [797..932] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle