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Protein Overview: SPBC646.03

General Information:
Name(s) found: SPBC646.03 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • glutamyl-tRNA amidotransferase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 471 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    mitochondrion [ISSLink to PubMed article]
    Biological Process: mitochondrial translation [ISSLink to PubMed article]
    tRNA metabolic process [ISSLink to PubMed article]
    Molecular Function: ATP binding [IEA]
    glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKYNNLLK EVAAKYASII LNDAKIKSLT SINSAEYLYD SFVEISKLPL EKKLPLKWKL  60
   61 ITVKENICTK TNLTTAASNM LKDYNSPFDA SIVESLKKAG GIILGKTNMD EFAMGVKSEN 120
  121 NLFGRTVNPV VKDSNYDVGG SSGGAAAAIA ADICYASVGS DTGGSIRLPA AYVGCVGFKP 180
  181 SFGRISRYGM LAFANSFDTV GIAANNVKGV TKVFNVLDHP DINDSTCLTK EARYFVKEQH 240
  241 KKLSRKPIKI GIPIDWNVSE THPNVLDKWN EFISLLKSNG YLVQEIQLPI SLYANSVYST 300
  301 MAYAEATSNL AKYNTIAFGN CLDEKFEEEI ISSTARSFFL GDEVKKRLLL GAYSLARMNS 360
  361 SDLFSKARYV RRAIQLEFNK NFFLPSFSVD DPRGDIDFIV TPSFFNSSQP IETPSSYSHL 420
  421 SDTMLVPANM AGIPSVSIPF GTLNNGLPMG IQIMAQYLND EDLLSFAGQF A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..471] PSI-BLAST 136.0 No description for 2df4A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
    		•  7.42914157198604 bayes_pls_golite062009
  • ligase activity
    		•  3.16753436373904 bayes_pls_golite062009
  • binding
    		•  1.24905380693412 bayes_pls_golite062009
  • catalytic activity
    		•  0.906509857495572 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.301483171038292 bayes_pls_golite062009
  • protein binding
    		•  0.276132955069873 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle