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Protein Overview: gar1

General Information:
Name(s) found: gar1 / SPBC20F10.01 [Sanger Pombe]
Description(s) found:
Found 25 descriptions.
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  • snoRNP pseudouridylase complex protein Gar1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 194 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nucleolus [IDALink to PubMed article]
    small nucleolar ribonucleoprotein complex [IGILink to PubMed article]
    Biological Process: rRNA modification [IGILink to PubMed article]
    rRNA processing [IGILink to PubMed article]
    Molecular Function: RNA binding [ISSLink to PubMed article]
    rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRGGRGGG FRGGRGGSRP FTPSGPPDQV IELGLFMHDC EGEMVCQSTN VKIPYFNAPI  60
   61 YLENKSQIGK IDEVFGPMNQ VYFTVKPSEG IVSSSFKVGD KVYLSGDKLI PLDRFLPKPK 120
  121 TVGPKKPKGA RNGPAGRGGR GGFRGGRGGS RGGFGGNSRG GFGGGSRGGF GGGSRGGSRG 180
  181 GFRGGSRGGF RGRF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] FFAS03 3.88 No description for 2v3mA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle