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Protein Overview: fib1

General Information:
Name(s) found: fib1 / SPBC2D10.10c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • fibrillarin [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 305 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    spindle [IDALink to PubMed article]
    nucleolus [IDALink to PubMed article][ISSLink to PubMed article]
    small nucleolar ribonucleoprotein complex [ISSLink to PubMed article]
    Biological Process: rRNA modification [ISSLink to PubMed article]
    RNA methylation [ISSLink to PubMed article]
    tRNA processing [IEA]
    rRNA processing [ISSLink to PubMed article]
    Molecular Function: mRNA binding [IPILink to PubMed article]
    methyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYTPGSRGG RGGSRGGRGG FNGGRGGFGG GRGGARGGGR GGARGGRGGR GGARGGRGGS  60
   61 SGGRGGAKGG AKVIIEPHRH AGVFIARGKE DLLVTRNLVP GESVYNEKRI SVDSPDGTKV 120
  121 EYRVWNPFRS KLAAGILGGL DNIYIKPGAR VLYLGAANGT SVSHVADVVG PEGLVYAVEF 180
  181 SHRSGRDLLN MAKKRTNVIP IVEDARHVQK YRMLVGMVDV VFADVAQPDQ ARIVALNAAA 240
  241 FLKNEGGVVI SVKASCIDST ADAAVVFARE VKKMQEEKIK PQEQLTLEPY ERDHCIIVGK 300
  301 YLRHQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..68] MSA 1.013996 View MSA. No confident structure predictions are available.
    2 View Details [69..305] PSI-BLAST 97.30103 No description for 2ipxA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle