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Protein Overview: cdc6

General Information:
Name(s) found: cdc6 / SPBC336.04 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • DNA polymerase delta catalytic subunit Cdc6 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1086 amino acids

    Gene Ontology:
    Cellular Component: delta DNA polymerase complex [TASLink to PubMed article]
    nucleus [IDALink to PubMed article]
    nuclear replication fork [ICLink to PubMed article]
    Biological Process: DNA synthesis involved in DNA repair [TASLink to PubMed article]
    DNA replication, removal of RNA primer [TASLink to PubMed article]
    Molecular Function: 3'-5' exonuclease activity [ICLink to PubMed article]
    DNA binding [IEA]
    DNA-directed DNA polymerase activity [TASLink to PubMed article]
    zinc ion binding [IEA]
    protein binding [IPILink to PubMed articleLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDRSSNEGV VLNKENYPFP RRNGSIHGEI TDVKRRRLSE RNGYGDKKGS SSKEKTSSFE  60
   61 DELAEYASQL DQDEIKSSKD QQWQRPALPA INPEKDDIYF QQIDSEEFTE GSVPSIRLFG 120
  121 VTDNGNSILV HVVGFLPYFY VKAPVGFRPE MLERFTQDLD ATCNGGVIDH CIIEMKENLY 180
  181 GFQGNEKSPF IKIFTTNPRI LSRARNVFER GEFNFEELFP VGVGVTTFES NTQYLLRFMI 240
  241 DCDVVGMNWI HLPASKYQFR YQNRVSNCQI EAWINYKDLI SLPAEGQWSK MAPLRIMSFD 300
  301 IECAGRKGVF PDPSIDPVIQ IASIVTQYGD STPFVRNVFC VDTCSQIVGT QVYEFQNQAE 360
  361 MLSSWSKFVR DVDPDVLIGY NICNFDIPYL LDRAKSLRIH NFPLLGRIHN FFSVAKETTF 420
  421 SSKAYGTRES KTTSIPGRLQ LDMLQVMQRD FKLRSYSLNA VCSQFLGEQK EDVHYSIITD 480
  481 LQNGTADSRR RLAIYCLKDA YLPQRLMDKL MCFVNYTEMA RVTGVPFNFL LARGQQIKVI 540
  541 SQLFRKALQH DLVVPNIRVN GTDEQYEGAT VIEPIKGYYD TPIATLDFSS LYPSIMQAHN 600
  601 LCYTTLLDSN TAELLKLKQD VDYSVTPNGD YFVKPHVRKG LLPIILADLL NARKKAKADL 660
  661 KKETDPFKKA VLDGRQLALK VSANSVYGFT GATNGRLPCL AISSSVTSYG RQMIEKTKDV 720
  721 VEKRYRIENG YSHDAVVIYG DTDSVMVKFG VKTLPEAMKL GEEAANYVSD QFPNPIKLEF 780
  781 EKVYFPYLLI SKKRYAGLFW TRTDTYDKMD SKGIETVRRD NCPLVSYVID TALRKMLIDQ 840
  841 DVEGAQLFTK KVISDLLQNK IDMSQLVITK ALSKTDYAAK MAHVELAERM RKRDAGSAPA 900
  901 IGDRVAYVII KGAQGDQFYM RSEDPIYVLE NNIPIDAKYY LENQLSKPLL RIFEPILGEK 960
  961 ASSLLHGDHT RTISMAAPSV GGIMKFAVKV ETCLGCKAPI KKGKTALCEN CLNRSAELYQ1020
 1021 RQVAQVNDLE VRFARLWTQC QRCQGSMHQD VICTSRDCPI FYMRIAEHKK LQQSVDLLKR1080
 1081 FDEMSW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..976] PSI-BLAST 1000.0 No description for 2gv9A was found.
    2 View Details [977..1086] FFAS03 1.04 No description for 2ysmA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle