YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: cdc45

General Information:
Name(s) found: cdc45 / SPAC17D4.02 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • DNA replication pre-initiation complex subunit Cdc45 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 638 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear chromatin [IDALink to PubMed article][IGILink to PubMed article]
    DNA replication preinitiation complex [IDALink to PubMed article]
    nuclear replication fork [ICLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: DNA replication preinitiation complex assembly [IMPLink to PubMed article]
    DNA replication initiation [ICLink to PubMed article]
    DNA strand elongation involved in DNA replication [TASLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed articleLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIKRSDYAS AYLKIKEASV SGGCTVQLFV ALDPDALCAC KLLSTLLKGD FISHKIRPVS  60
   61 GYRDLEQANK TLLEQNEDIK FIILLNCGTM VDLNNYLVSM EDVSIYVIDS HRPHNLNNIY 120
  121 IENNIFVFDD GDIEEDMNKI HDAWYAFNSH ELSDEENSDS SNEREEEVED DNRSVESYSS 180
  181 SDYQARSRRR FSEETTQRRA EIKEKRKKRK EFASILSEYY EKGSWYGESI TNILFAVASM 240
  241 LGREDNDMLW LAIVGLTCLE IHCQSSKKYF NRSYSLLKDE VNRLNPSPLE NQIVGRAHGK 300
  301 TPHDQSIRLE DEFRFMLVRH WSLYDSMLHS AYVGSRLHIW SEEGRKRLHK LLAKMGLSLV 360
  361 ECKQTYIHMN MDLKKTLKSS LKRFAPFYGL DDVIFHSFTR TYGFKCTLSA SDVSYAISAL 420
  421 LEMGNTGVLL QSKTVARSPD MTEEEYLEKF ENAQNQEWLH NFYDAYDALD DVDSLERALK 480
  481 LAMHLQRAIV RTGITLLEKR AIKTLRSFRF GLINEGPDLK IFMHPLALTK MSLWIAEAIN 540
  541 EQEREFGKLR HLPLVLAAFV EEKNRYLIVG TSTSAFTSNE DDDDDDGHGH NRFGVAFQEV 600
  601 ANMTSATLQM DCFEASVIEC QKSDLGVFLE SLSFKTLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..303] deduced N/A No confident structure predictions are available.
    2 View Details [304..428] MSA 1.033972 View MSA. Confident ab initio structure predictions are available.
    3 View Details [429..638] MSA 1.031955 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle