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Protein Overview: bio2

General Information:
Name(s) found: bio2 / SPCC1235.02 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • biotin synthase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 363 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: biotin biosynthetic process [ICLink to PubMed article]
    vitamin metabolic process [NASLink to PubMed article]
    Molecular Function: iron ion binding [IEA]
    biotin synthase activity [ISSLink to PubMed article]
    4 iron, 4 sulfur cluster binding [IEA]
    iron-sulfur cluster binding [IEA]
    2 iron, 2 sulfur cluster binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTRTIRQQI RRSSALSLVR NNWTREEIQK IYDTPLIDLI FRAASIHRKF HDPKKVQQCT  60
   61 LLSIKTGGCT EDCKYCAQSS RYNTGVKATK LMKIDEVLEK AKIAKAKGST RFCMGSAWRD 120
  121 LNGRNRTFKN ILEIIKEVRS MDMEVCVTLG MLNEQQAKEL KDAGLTAYNH NLDTSREYYS 180
  181 KIISTRTYDE RLNTIDNLRK AGLKVCSGGI LGLGEKKHDR VGLIHSLATM PTHPESVPFN 240
  241 LLVPIPGTPV GDAVKERLPI HPFLRSIATA RICMPKTIIR FAAGRNTCSE SEQALAFMAG 300
  301 ANAVFTGEKM LTTPAVSWDS DSQLFYNWGL EGMQSFEYGT STEGEDGTFT LPPKERLAPS 360
  361 PSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..363] PSI-BLAST 71.69897 The Crystal Structure of Biotin Synthase, an S-Adenosylmethionine-Dependent Radical Enzyme

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • biotin synthase activity
    		•  4.96431653338581 bayes_pls_golite062009
  • radical SAM enzyme activity
    		•  4.81217611621334 bayes_pls_golite062009
  • sulfurtransferase activity
    		•  3.43375708969779 bayes_pls_golite062009
  • transferase activity, transferring sulfur-containing groups
    		•  2.79703059227143 bayes_pls_golite062009
  • coproporphyrinogen oxidase activity
    		•  1.98937742831419 bayes_pls_golite062009
  • catalytic activity
    		•  1.48331922124015 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
    		•  1.37188743230327 bayes_pls_golite062009
  • binding
    		•  1.19681284943457 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  1.18901545014659 bayes_pls_golite062009
  • transferase activity
    		•  0.685192555939835 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.593156857804038 bayes_pls_golite062009
  • protein binding
    		•  0.374124957429525 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle