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Protein Overview: atf21

General Information:
Name(s) found: atf21 / SPBC2F12.09c [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • transcription factor Atf21 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 355 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ICLink to PubMed article][IDALink to PubMed article]
    Biological Process: regulation of meiosis [IDALink to PubMed article]
    positive regulation of transcription from RNA polymerase II promoter, meiotic [IEPLink to PubMed article]
    gene-specific transcription from RNA polymerase II promoter [RCALink to PubMed article]
    Molecular Function: transcription factor activity [IDALink to PubMed article]
    specific RNA polymerase II transcription factor activity [RCALink to PubMed article]
    sequence-specific DNA binding [IEA]
    protein dimerization activity [IEA]
    transcription activator activity [IEPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFANVYLGL DTLGNEGYGA SVSNGTHHDF HFNFNTFRDG GNHEVGEKRA ESSDIGVYEC  60
   61 RGPVQGPKDQ TSFPSNSHNN YASIVGDASI GHYLKGPERT SEVSLPQTVN LSEISNNNDK 120
  121 GQPTNTPPVR STIVAPSLYS EGSTLNHYNN GSHQVLHPQF QNGTNAPYVV QSNLMQNNVN 180
  181 LTGAEQEKGL DLYKNSATAN NDEIFYNLES LRREGYLNSN KKQSQSPNGD YNSSDESCSN 240
  241 KTVASSQRRG TPGSNNVHTA SNNETPDMKR RRFLERNRIA ASKCRQKKKL WTQNLEKTAH 300
  301 IACEQSKALR ILVSQLREEV ICLKNQLLAH QDCNCEGIRQ YLSSEAQGIM SFQKH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] MSA 7.170996 View MSA. No confident structure predictions are available.
    2 View Details [141..246] deduced N/A No confident structure predictions are available.
    3 View Details [247..355] PSI-BLAST 6.39794 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle