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Protein Overview: alp16

General Information:
Name(s) found: alp16 / SPCC4G3.19 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • gamma tubulin complex subunit Alp16 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 759 amino acids

    Gene Ontology:
    Cellular Component: spindle pole body [ICLink to PubMed article][IDALink to PubMed article]
    equatorial microtubule organizing center [IDALink to PubMed article]
    gamma-tubulin complex [IDALink to PubMed article]
    Biological Process: microtubule cytoskeleton organization [IMPLink to PubMed article]
    interphase microtubule nucleation by interphase microtubule organizing center [IGILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGIMKNDLL WFGNHVFDLT PNSFDSDFVE QLSKFEGKEG LKRKLFDSSE YFQNFSFQVN  60
   61 DDLLGKDVIL DISNQQLTPA VPGCETSSNS KLISASKEIT SERKRAKSSV SPSYLTDSSP 120
  121 SDLSVENKVL LTCPSWDGEN FKNLEARSPF ISEAPSRVYD YFLHNQDWSP KPLFSALQVY 180
  181 PLATIFNCVA GLPQGFESTV FPWNKTSSTF ELDPTISVSG MSDECFASIV QKFSAIGGLI 240
  241 KKALNEFSLY KTNISFYLSN FIVNGVLQYR KEFQRWLRLY EFRRFGLIGL SNFVNSFSSF 300
  301 FELISHFLIK SAQNLKGDSL LDFLFDYARS CQNTISYPIA LQCLIYCSNP YFKRLELALK 360
  361 VSCAYGHIDS SLFLSLPRFF PSELCVSIEQ CIQFLSLIRE QKEIFNKNNK EFINPLNIRF 420
  421 AYSFNDINQA CVIEERCNFS SLSFGNLEQT SVNNDSEEFE TLLAKMNMTP DFNDNLLQLK 480
  481 FTDDVRNVCP LNLNVCCCIA EPIQSFILSF LRSTYKVLKN DFQVFDLLNF FHSTFLFQNY 540
  541 EFSDNVISLL KSRRLDKSDR NELAEDLNSD DRYNFISRLK KFIFMEKEKN GLSRSLSKSI 600
  601 TFTLDSASVS EFEDVYPDLQ FQCQVIGALR ILFTDNSLNY YSKTFSYVLH LFQAQSDFES 660
  661 SVELKDRSIV TKTTIMSWSK YQGTKESLFQ FLSIYIPECM LPFTKLLKSI YSPDCPTNIQ 720
  721 NSAIKNAASV HEQCTKAIYQ KVKELFDTMK LWESSIKVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..206] deduced N/A No confident structure predictions are available.
    2 View Details [207..438] deduced N/A No confident structure predictions are available.
    3 View Details [439..658] deduced N/A No confident structure predictions are available.
    4 View Details [659..759] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle