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Protein Overview: pab1

General Information:
Name(s) found: pab1 / SPAC227.07c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • protein phosphatase regulatory subunit Pab1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 463 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    protein phosphatase type 2A complex [IEA]
    Biological Process: regulation of translation [ISS]
    signal transduction [IEA]
    cell morphogenesis [IMPLink to PubMed article]
    regulation of catalytic activity [IC]
    regulation of cytokinesis [IMPLink to PubMed article]
    regulation of fungal-type cell wall biogenesis [IMPLink to PubMed article]
    Molecular Function: protein phosphatase type 2A regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDIEDSLDQ WKFAQCFGDK GDVEDITEAD IISAVEFDHT GDYLATGDKG GRVVLFERNH  60
   61 SKKGCEYKFF TEFQSHEPEF DYLKSLEIEE KINKIRWCKR TNRAHFLLST NDKTIKLWKL 120
  121 YEKNLKVVAE NNLSDSFHSP MQGPLTTPSQ LRLPRLNHHD MIIAAYPRRV YANAHAYHIN 180
  181 SISVNSDAET YISADDLRIN LWNLSISDHS FNIVDIKPEN MEELTEVITS AEFHPINCNH 240
  241 LMYSSSKGNI KLLDLRQSAL CDNPCKLFED QEDQDSKSFF SEIISSISDV KFSQNGRYIL 300
  301 SRDYLTLKIW DVNMEKAPVK TIPLHDVLRS KLCDLYENDC IFDKFECTFS GDDKHVLSGS 360
  361 YSNNFGIYPT DSSLPGDRGQ IVLQADKAAF RARKSAANNV PKLNAVKNND WRSQPQAAMG 420
  421 SASVGLDPDN LDYNKKILHA SWHPFEDSVA IAATNNLFVF SKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..463] PSI-BLAST 39.09691 Actin interacting protein 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytoskeletal protein binding
    		•  3.1056443224755 bayes_pls_golite062009
  • tubulin binding
    		•  2.76945430061825 bayes_pls_golite062009
  • microtubule binding
    		•  2.72684103222924 bayes_pls_golite062009
  • dynein binding
    		•  2.54821997913979 bayes_pls_golite062009
  • binding
    		•  2.42570478946173 bayes_pls_golite062009
  • actin binding
    		•  2.27900251096697 bayes_pls_golite062009
  • hydrolase activity
    		•  1.72636554646684 bayes_pls_golite062009
  • protein binding
    		•  1.21879977456466 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.693814013902061 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.579815310385678 bayes_pls_golite062009
  • actin filament binding
    		•  0.554537899540618 bayes_pls_golite062009
  • kinase activity
    		•  0.498626428956965 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.496422970081867 bayes_pls_golite062009
  • snoRNA binding
    		•  0.347797037104681 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.326899344050856 bayes_pls_golite062009
  • structural molecule activity
    		•  0.254012051644049 bayes_pls_golite062009
  • protein kinase activity
    		•  0.245792286293244 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.118975415284669 bayes_pls_golite062009
  • DNA binding
    		•  0.0736878329528894 bayes_pls_golite062009
    		• 0.0248988265652406 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle