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Protein Overview: CG32500-PA, CG33...

General Information:
Name(s) found: CG32500-PA / FBpp0077066 [FlyBase]
CG33502-PA / FBpp0070054 [FlyBase]
CG32857-PA / FBpp0070051 [FlyBase]
Description(s) found:
Found 45 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG32500 (CG32500, FBgn0052500). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:21492568..21494777. It has the cytological map location 20A4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: iron-sulfur cluster binding; iron ion binding; ATP binding; ATP-dependent helicase activity; nucleic acid binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: iron-sulfur cluster assembly. No alleles are reported. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG33502 (CG33502, FBgn0053502). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:21480382..21482531. It has the cytological map location 20A4. Its molecular function is unknown. The biological processes in which it is involved are not known. No alleles are reported. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG32857 (CG32857, FBgn0052857). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:21486478..21488623. It has the cytological map location 20A4. Based on sequence similarity, it is predicted to have molecular function</span>: ATP binding; ATP-dependent helicase activity; nucleic acid binding. The biological processes in which it is involved are not known. No alleles are reported. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    iron-sulfur cluster assembly [IEA]
    Molecular Function: nucleic acid binding [IEA][ISS]
    ATP binding [IEA][ISS]
    iron ion binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    iron-sulfur cluster binding [IEA]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKFLSQAAL NTLRNTRLGS RQLVRSFKGI SNTRNHRIPA HQESGCGHSV GCGLLELRMP  60
   61 VACRRSMFIQ TQDTPNPESL KFLPGVDVLG KGNTYDFPNG TTAHNSPLAK LLFRVEGVKG 120
  121 VFFGADFVTI SKQEGAEWSL IKPEVFAVIM DFFASGLPVL NDAQPNADTE ILEDDDETVM 180
  181 MIKELLDTRI RPTVQEDGGD IVFMGYEGGV VKLKMQGSCS SCPSSIVTLK NGVQNMLQFY 240
  241 IPEVESVEQV FDEADRMIES EFERFEKNLK TLKQQEPSGG GPH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] PSI-BLAST 12.522879 Solution Structure of the Hypothetical Staphylococcus Aureus protein SAV1430. Northest Strucutral Genomics Consortium target ZR18
    2 View Details [170..283] PSI-BLAST 24.522879 Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.60409960326459 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  1.28617491223126 bayes_pls_golite062009
  • 2 iron, 2 sulfur cluster binding
    		•  1.15693786817459 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  0.692336376163639 bayes_pls_golite062009
  • metal cluster binding
    		•  0.692336376163639 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle