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Protein Overview: FBpp0309320, Obp...

General Information:
Name(s) found: FBpp0309320 [FlyBase]
Obp19c-PA / FBpp0077018 [FlyBase]
Description(s) found:
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  • gi|90855763|gb|ABE01243.1| IP02009p [Drosophila melanogaster] [NCBI NR]
  • gi|7295598|gb|AAF50908.1| Odorant-binding protein 19c [Drosophila melanogaster] [NCBI NR]
  • gi|24643505|ref|NP_608392.1| Odorant-binding protein 19c [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=X:complement(20289199..20289411,20289478..20289792); ID=FBpp0309320; name=Obp19c-PC; parent=FBgn0031111,FBtr0340362; dbxref=FlyBase:FBpp0309320,FlyBase_Annotation_IDs:CG15457-PC; MD5=a2049ff1d26bce3aa430de7628fd39e6; length=175; release=r5.56; species=Dmel; [FlyBase]
  • The gene Odorant-binding protein 19c is referred to in FlyBase by the symbol Dmel\Obp19c (CG15457, FBgn0031111). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:20288948..20289991. It has the cytological map location 19D1. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG15457-PA translation from_gene[CG15457 Obp19c FBgn0031111] seq_release:3 mol_weight=19385 cds_boundaries:(X:20,090,973..20,091,563[-]) aa_length:175 transcript_info:[CG15457-RA seq_release:3] gene_info:[gene symbol:Obp19c FBgn0031111 gene_boundaries [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VR96) CG15457 protein [DrosMelano7227.FASTAC.txt]
  • (AE003571) CG15457 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG15457-PA, isoform A [Drosophila melanogaster]gi|24643505|ref|NP_608392.1| CG15457-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:complement(20289199..20289411,20289478..20289792); ID=FBpp0077018; name=Obp19c-PA; parent=FBgn0031111,FBtr0077326; dbxref=FlyBase:FBpp0077018,FlyBase_Annotation_IDs:CG15457-PA,GB_protein:AAF50908.1,REFSEQ:NP_608392,GB_protein:AAF50908; [fly-100309-contam.fasta]
  • CG15457-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • IP02009p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant-binding protein 19c CG15457-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:complement(20289199..20289411,20289478..20289792); ID=FBpp0077018; name=Obp19c-PA; parent=FBgn0031111,FBtr0077326; dbxref=FlyBase:FBpp0077018,FlyBase_Annotation_IDs:CG15457-PA,GB_protein:AAF50908.1,REFSEQ:NP_608392,GB_protein:AAF50908; MD5=a2049ff1d26bce3aa430de7628fd39e6; length=175; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:complement(20289199..20289411,20289478..20289792); ID=FBpp0077018; name=Obp19c-PA; parent=FBgn0031111,FBtr0077326; dbxref=FlyBase:FBpp0077018,FlyBase_Annotation_IDs:CG15457-PA,GB_protein:AAF50908.1,REFSEQ:NP_608392,GB_protein:AAF50908; MD5=a2049ff1d26bce3aa430de7628fd39e6; length=175; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • IP02009p OS=Drosophila melanogaster GN=Obp19c PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:complement(20289199..20289411,20289478..20289792); ID=FBpp0077018; name=Obp19c-PA; parent=FBgn0031111,FBtr0077326; dbxref=FlyBase:FBpp0077018,FlyBase_Annotation_IDs:CG15457-PA,GB_protein:AAF50908.1,REFSEQ:NP_608392,GB_protein:AAF50908,FlyMine:FBpp0077018,modMine:FBpp0077018; MD5=a2049ff1d26bce3aa430de7628fd39e6; length=175; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:complement(join(20418451..20418765,20418172..20418384)); ID=FBpp0077018; name=Obp19c-PA; parent=FBgn0031111,FBtr0077326; dbxref=FlyBase:FBpp0077018,FlyBase_Annotation_IDs:CG15457-PA,GB_protein:AAF50908.1,REFSEQ:NP_608392,GB_protein:AAF50908,FlyMine:FBpp0077018,modMine:FBpp0077018; MD5=a2049ff1d26bce3aa430de7628fd39e6; length=175; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(join(20418451..20418765,20418172..20418384)); ID=FBpp0309320; name=Obp19c-PC; parent=FBgn0031111,FBtr0340362; dbxref=FlyBase:FBpp0309320,FlyBase_Annotation_IDs:CG15457-PC,GB_protein:AAN09546,REFSEQ:NP_728340; MD5=a2049ff1d26bce3aa430de7628fd39e6; length=175; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(join(20418451..20418765,20418172..20418384)); ID=FBpp0077018; name=Obp19c-PA; parent=FBgn0031111,FBtr0077326; dbxref=FlyBase:FBpp0077018,FlyBase_Annotation_IDs:CG15457-PA,GB_protein:AAF50908.1,REFSEQ:NP_608392,GB_protein:AAF50908,FlyMine:FBpp0077018,modMine:FBpp0077018; MD5=a2049ff1d26bce3aa430de7628fd39e6; length=175; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:complement(join(20418451..20418765,20418172..20418384)); ID=FBpp0309320; name=Obp19c-PC; parent=FBgn0031111,FBtr0340362; dbxref=FlyBase:FBpp0309320,FlyBase_Annotation_IDs:CG15457-PC,GB_protein:AAN09546,REFSEQ:NP_728340; MD5=a2049ff1d26bce3aa430de7628fd39e6; length=175; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0077018 type=protein; loc=X:complement(join(20418451..20418765,20418172..20418384)); ID=FBpp0077018; name=Obp19c-PA; parent=FBgn0031111,FBtr0077326; dbxref=FlyBase:FBpp0077018,FlyBase_Annotation_IDs:CG15457-PA,GB_protein:AAF50908.1,REFSEQ:NP_608392,GB_protein:AAF50908,FlyMine:FBpp0077018,modMine:FBpp0077018; MD5=a2049ff1d26bce3aa430de7628fd39e6; length=175; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0309320 type=protein; loc=X:complement(join(20418451..20418765,20418172..20418384)); ID=FBpp0309320; name=Obp19c-PC; parent=FBgn0031111,FBtr0340362; dbxref=FlyBase:FBpp0309320,FlyBase_Annotation_IDs:CG15457-PC,GB_protein:AAN09546,REFSEQ:NP_728340; MD5=a2049ff1d26bce3aa430de7628fd39e6; length=175; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:complement(join(20418451..20418765,20418172..20418384)); ID=FBpp0077018; name=Obp19c-PA; parent=FBgn0031111,FBtr0077326; dbxref=FlyBase:FBpp0077018,FlyBase_Annotation_IDs:CG15457-PA,GB_protein:AAF50908.1,REFSEQ:NP_608392,GB_protein:AAF50908,UniProt/TrEMBL:Q9VR96,FlyMine:FBpp0077018,modMine:FBpp0077018; MD5=a2049ff1d26bce3aa430de7628fd39e6; length=175; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:complement(join(20418451..20418765,20418172..20418384)); ID=FBpp0309320; name=Obp19c-PC; parent=FBgn0031111,FBtr0340362; dbxref=FlyBase:FBpp0309320,FlyBase_Annotation_IDs:CG15457-PC,GB_protein:AAN09546,REFSEQ:NP_728340,UniProt/TrEMBL:Q9VR96; MD5=a2049ff1d26bce3aa430de7628fd39e6; length=175; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 175 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN][ISS]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPSTPVAAI PLMTIVVAVL LQTHCVRGQT QAFDLAKLLP KTGTEPIWAV IDRNLPQVQE  60
   61 LVTAARMECI QKLQLPRDQR PLGKVTNPSE KEKCLVECVL KKIKLMDADN KLNVGQVEKL 120
  121 TSLVTQDNKM AIAVSSSMAQ ACSRGISSKN PCEVAHLFNQ CISRQLERNN VKLVW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..175] PSI-BLAST 22.221849 AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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