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Protein Overview: Muc18B-PA, FBpp0...

General Information:
Name(s) found: FBpp0311892 [FlyBase]
Muc18B-PA / FBpp0074444 [FlyBase]
Description(s) found:
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  • gi|7293563|gb|AAF48936.1| CG7876 [Drosophila melanogaster] [NCBI NR]
  • gi|18860525|ref|NP_573365.1| CG7876 [Drosophila melanogaster] [NCBI NR]
  • gi|18447471|gb|AAL68298.1| RE41571p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=X:19109596..19110522; ID=FBpp0311892; name=Muc18B-PB; parent=FBgn0031000,FBtr0346019; dbxref=FlyBase:FBpp0311892,FlyBase_Annotation_IDs:CG7876-PB; MD5=879dcb61a73c689e69978d2e33e7898e; length=308; release=r5.56; species=Dmel; [FlyBase]
  • The gene Mucin 18B is referred to in FlyBase by the symbol Dmel\Muc18B (CG7876, FBgn0031000). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:19109550..19110623. It has the cytological map location 18B1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: chitin binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: chitin metabolic process. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG7876-PA translation from_gene[CG7876 CG7876 FBgn0031000] seq_release:3 mol_weight=32236 cds_boundaries:(X:18,946,523..18,947,446[+]) aa_length:308 transcript_info:[CG7876-RA seq_release:3] gene_info:[gene symbol:CG7876 FBgn0031000 gene_boundaries:(X [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VWK2) CG7876 protein (RE41571p) [DrosMelano7227.FASTAC.txt]
  • (AE003511) CG7876 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG7876-PA [Drosophila melanogaster]gi|18447471|gb|AAL68298.1| RE41571p [Drosophila melanogaster]gi|18860525|ref|NP_573365.1| CG7876-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:19109596..19110522; ID=FBpp0074444; name=Muc18B-PA; parent=FBgn0031000,FBtr0074673; dbxref=FlyBase:FBpp0074444,FlyBase_Annotation_IDs:CG7876-PA,GB_protein:AAF48936.1,REFSEQ:NP_573365,GB_protein:AAF48936; MD5=879dcb61a73c689e69978d2e33e [fly-100309-contam.fasta]
  • RE41571p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG7876-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:19109596..19110522; ID=FBpp0074444; name=Muc18B-PA; parent=FBgn0031000,FBtr0074673; dbxref=FlyBase:FBpp0074444,FlyBase_Annotation_IDs:CG7876-PA,GB_protein:AAF48936.1,REFSEQ:NP_573365,GB_protein:AAF48936; MD5=879dcb61a73c689e69978d2e33e7898e; length=308; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:19109596..19110522; ID=FBpp0074444; name=Muc18B-PA; parent=FBgn0031000,FBtr0074673; dbxref=FlyBase:FBpp0074444,FlyBase_Annotation_IDs:CG7876-PA,GB_protein:AAF48936.1,REFSEQ:NP_573365,GB_protein:AAF48936; MD5=879dcb61a73c689e69978d2e33e7898e; length=308; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Mucin 18B OS=Drosophila melanogaster GN=Muc18B PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:19109596..19110522; ID=FBpp0074444; name=Muc18B-PA; parent=FBgn0031000,FBtr0074673; dbxref=FlyBase:FBpp0074444,FlyBase_Annotation_IDs:CG7876-PA,GB_protein:AAF48936.1,REFSEQ:NP_573365,GB_protein:AAF48936,FlyMine:FBpp0074444,modMine:FBpp0074444; MD5=879dcb61a73c689e69978d2e33e7898e; length=308; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:19215563..19216489; ID=FBpp0074444; name=Muc18B-PA; parent=FBgn0031000,FBtr0074673; dbxref=FlyBase:FBpp0074444,FlyBase_Annotation_IDs:CG7876-PA,GB_protein:AAF48936.1,REFSEQ:NP_573365,GB_protein:AAF48936,FlyMine:FBpp0074444,modMine:FBpp0074444; MD5=879dcb61a73c689e69978d2e33e7898e; length=308; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:19215563..19216489; ID=FBpp0311892; name=Muc18B-PB; parent=FBgn0031000,FBtr0346019; dbxref=FlyBase:FBpp0311892,FlyBase_Annotation_IDs:CG7876-PB,GB_protein:AHN59901,REFSEQ:NP_001285431; MD5=879dcb61a73c689e69978d2e33e7898e; length=308; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:19215563..19216489; ID=FBpp0074444; name=Muc18B-PA; parent=FBgn0031000,FBtr0074673; dbxref=FlyBase:FBpp0074444,FlyBase_Annotation_IDs:CG7876-PA,GB_protein:AAF48936.1,REFSEQ:NP_573365,GB_protein:AAF48936,FlyMine:FBpp0074444,modMine:FBpp0074444; MD5=879dcb61a73c689e69978d2e33e7898e; length=308; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:19215563..19216489; ID=FBpp0311892; name=Muc18B-PB; parent=FBgn0031000,FBtr0346019; dbxref=FlyBase:FBpp0311892,FlyBase_Annotation_IDs:CG7876-PB,GB_protein:AHN59901,REFSEQ:NP_001285431; MD5=879dcb61a73c689e69978d2e33e7898e; length=308; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Mucin 18B, isoform A OS=Drosophila melanogaster GN=Muc18B PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0074444 type=protein; loc=X:19215563..19216489; ID=FBpp0074444; name=Muc18B-PA; parent=FBgn0031000,FBtr0074673; dbxref=FlyBase:FBpp0074444,FlyBase_Annotation_IDs:CG7876-PA,GB_protein:AAF48936.1,REFSEQ:NP_573365,GB_protein:AAF48936,FlyMine:FBpp0074444,modMine:FBpp0074444; MD5=879dcb61a73c689e69978d2e33e7898e; length=308; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0311892 type=protein; loc=X:19215563..19216489; ID=FBpp0311892; name=Muc18B-PB; parent=FBgn0031000,FBtr0346019; dbxref=FlyBase:FBpp0311892,FlyBase_Annotation_IDs:CG7876-PB,GB_protein:AHN59901,REFSEQ:NP_001285431; MD5=879dcb61a73c689e69978d2e33e7898e; length=308; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:19215563..19216489; ID=FBpp0074444; name=Muc18B-PA; parent=FBgn0031000,FBtr0074673; dbxref=FlyBase:FBpp0074444,FlyBase_Annotation_IDs:CG7876-PA,GB_protein:AAF48936.1,REFSEQ:NP_573365,GB_protein:AAF48936,UniProt/TrEMBL:Q9VWK2,FlyMine:FBpp0074444,modMine:FBpp0074444; MD5=879dcb61a73c689e69978d2e33e7898e; length=308; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:19215563..19216489; ID=FBpp0311892; name=Muc18B-PB; parent=FBgn0031000,FBtr0346019; dbxref=FlyBase:FBpp0311892,FlyBase_Annotation_IDs:CG7876-PB,GB_protein:AHN59901,REFSEQ:NP_001285431,UniProt/TrEMBL:Q9VWK2; MD5=879dcb61a73c689e69978d2e33e7898e; length=308; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 308 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEA]
    Biological Process: chitin metabolic process [IEA]
    Molecular Function: chitin binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKLTMLMGL ALILAPSTIQ AKSLCRSSGY FALVDNTPDF YACQSTAYGG YSLRFLRCPA  60
   61 GLVFSSSMAQ CVQSIAAFEA RDDSNIENPT IPPSNLDEST TEKPATEAPG TTEKVTTAAP 120
  121 GTTEKVTTEA PGTTEKITTE APGTTEKITT EAPGTTEKIT TEAPGTTEKI TTEAPGTTEK 180
  181 PATDAPGTTE KPATDAPGTT EKSETTDAPG TTDKSDTDAP ITDEPSTAET STDEPNTETT 240
  241 ESGEETTIED NVCATTGLFP TGSCTHFIVC SYAEGDELKA YTKKCPGEMQ FDPFNSVCSA 300
  301 SYDCTAGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] deduced N/A No confident structure predictions are available.
    2 View Details [95..308] FFAS03 1.09 No description for 2j63A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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