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View Structure Prediction Details

Protein: Muc18B-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 308 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Muc18B-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|88188037, gi|... - gi|88602575|ref|YP_502753.1| mucin 2, intestinal/tracheal [Methanospirillum hungatei JF-1], gi|88188...
153.0 [0..4] [307..1815]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKLTMLMGL ALILAPSTIQ AKSLCRSSGY FALVDNTPDF YACQSTAYGG YSLRFLRCPA  60
   61 GLVFSSSMAQ CVQSIAAFEA RDDSNIENPT IPPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLDESTTEKP ATEAPGTTEK VTTAAPGTTE KVTTEAPGTT EKITTEAPGT TEKITTEAPG  60
   61 TTEKITTEAP GTTEKITTEA PGTTEKPATD APGTTEKPAT DAPGTTEKSE TTDAPGTTDK 120
  121 SDTDAPITDE PSTAETSTDE PNTETTESGE ETTIEDNVCA TTGLFPTGSC THFIVCSYAE 180
  181 GDELKAYTKK CPGEMQFDPF NSVCSASYDC TAGN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.09
Match: 2j63A
Description: No description for 2j63A was found.

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